X-ray Structure of Interferon Regulatory Factor 4 DNA binding domain bound to interferon-stimulated response element
Agnarelli, A., El Omari, K., Alt, A.O., Mancini, E.J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Interferon regulatory factor 4 | 141 | Homo sapiens | Mutation(s): 0  Gene Names: IRF4, MUM1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q15306 (Homo sapiens) Explore Q15306  Go to UniProtKB:  Q15306 | |||||
PHAROS:  Q15306 GTEx:  ENSG00000137265  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q15306 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(P*TP*CP*AP*AP*CP*TP*GP*AP*AP*AP*CP*CP*GP*AP*GP*AP*AP*AP*GP*C)-3') | 20 | Mus musculus | |||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(P*AP*GP*CP*TP*TP*TP*CP*TP*CP*GP*GP*TP*TP*TP*CP*AP*GP*TP*TP*G)-3') | D [auth E] | 20 | Mus musculus | ||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PO4 Query on PO4 | E [auth B] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |
Length ( Å ) | Angle ( ˚ ) |
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a = 64.78 | α = 90 |
b = 83.25 | β = 90 |
c = 88.53 | γ = 90 |
Software Name | Purpose |
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xia2 | data reduction |
xia2 | data scaling |
PHASER | phasing |
PHENIX | refinement |
Funding Organization | Location | Grant Number |
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Wellcome Trust | United Kingdom | 204833/Z/16/Z |