7O3O

Structure of haloalkane dehalogenase mutant DhaA80(T148L, G171Q, A172V, C176F) from Rhodococcus rhodochrous with ionic liquid


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.25 Å
  • R-Value Free: 0.153 
  • R-Value Work: 0.125 
  • R-Value Observed: 0.126 

Starting Model: experimental
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This is version 2.1 of the entry. See complete history


Literature

Stabilization of Haloalkane Dehalogenase Structure by Interfacial Interaction with Ionic Liquids

Shaposhnikova, A.Kuty, M.Chaloupkova, R.Damborsky, J.Kuta Smatanova, I.Minofar, B.Prudnikova, T.

(2021) Crystals (Basel) 11


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Haloalkane dehalogenase299Rhodococcus rhodochrousMutation(s): 4 
Gene Names: dhaA
EC: 3.8.1.5
UniProt
Find proteins for P0A3G2 (Rhodococcus rhodochrous)
Explore P0A3G2 
Go to UniProtKB:  P0A3G2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP0A3G2
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.25 Å
  • R-Value Free: 0.153 
  • R-Value Work: 0.125 
  • R-Value Observed: 0.126 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 52.315α = 90
b = 69.954β = 90
c = 83.816γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction
XDSdata reduction
XDSdata scaling
MOLREPphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Grant Agency of the Czech RepublicCzech Republic17-24321S
German Federal Ministry for Education and ResearchGermanyDAAD-16-09
European Regional Development FundCzech RepublicCZ.02.1.01/0.0/0.0/15_003/0000441
European Regional Development FundCzech RepublicCZ.02.1.01/0.0/0.0/16_019/0000778
European Regional Development FundCzech RepublicLM2015047
European Regional Development FundCzech RepublicLM2018121
Ministry of Education (MoE, Czech Republic)Czech RepublicCZ.02.1.01/0.0/0.0/16_026/0008451

Revision History  (Full details and data files)

  • Version 1.0: 2021-09-08
    Type: Initial release
  • Version 1.1: 2021-09-15
    Changes: Database references
  • Version 2.0: 2023-11-15
    Changes: Atomic model, Data collection
  • Version 2.1: 2024-01-31
    Changes: Refinement description