7N45 | pdb_00007n45

Solution NMR structure of the N-terminal globular domain of the endemic HKU1 coronavirus nucleocapsid protein

PDB DOI: https://doi.org/10.2210/pdb7N45/pdb
BMRB: 50507

Classification: RNA BINDING PROTEIN
Organism(s): Human coronavirus HKU1
Expression System: Escherichia coli BL21
Mutation(s): No

Deposited: 2021-06-03 Released: 2022-06-08
Deposition Author(s): Caruso, I.P., Marques, A.L., Santana-Silva, M.C., Almeida, F.C.L., Amorim, G.C.
Funding Organization(s): Fundacao Carlos Chagas Filho de Amparo a Pesquisa do Estado do Rio de Janeiro (FAPERJ)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 150000
Conformers Submitted: 19
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 7N45

This is version 1.2 of the entry. See complete history.

Literature

Solution NMR structure of the N-terminal globular domain of the endemic HKU1 coronavirus nucleocapsid protein.

Caruso, I.P., Marques, A.L., Santana-Silva, M.C., Almeida, F.C.L., Amorim, G.C.

To be published.

Macromolecule Content

Total Structure Weight: 15.47 kDa
Atom Count: 1,101
Modeled Residue Count: 138
Deposited Residue Count: 138
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Nucleoprotein	A	138	Human coronavirus HKU1	Mutation(s): 0
UniProt
Find proteins for Q5MQC6 (Human coronavirus HKU1 (isolate N1)) Explore Q5MQC6 Go to UniProtKB: Q5MQC6
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q5MQC6
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 150000
Conformers Submitted: 19
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2022-06-08

Deposition Author(s):

Santana-Silva, M.C.

Almeida, F.C.L.

Funding Organization	Location	Grant Number
Fundacao Carlos Chagas Filho de Amparo a Pesquisa do Estado do Rio de Janeiro (FAPERJ)	Brazil	255940
Fundacao Carlos Chagas Filho de Amparo a Pesquisa do Estado do Rio de Janeiro (FAPERJ)	Brazil	239016
Fundacao Carlos Chagas Filho de Amparo a Pesquisa do Estado do Rio de Janeiro (FAPERJ)	Brazil	239229
Fundacao Carlos Chagas Filho de Amparo a Pesquisa do Estado do Rio de Janeiro (FAPERJ)	Brazil	248462
Fundacao Carlos Chagas Filho de Amparo a Pesquisa do Estado do Rio de Janeiro (FAPERJ)	Brazil	34567

Revision History (Full details and data files)

Version 1.0: 2022-06-08
Type: Initial release
Version 1.1: 2023-06-14
Changes: Other
Version 1.2: 2024-05-15
Changes: Data collection, Database references

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.