7MFW

Drosophila melanogaster Canoe PDZ domain in complex with Echinoid C-terminal region


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.192 
  • R-Value Observed: 0.196 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Multivalent interactions make adherens junction-cytoskeletal linkage robust during morphogenesis.

Perez-Vale, K.Z.Yow, K.D.Johnson, R.I.Byrnes, A.E.Finegan, T.M.Slep, K.C.Peifer, M.

(2021) J Cell Biol 220

  • DOI: https://doi.org/10.1083/jcb.202104087
  • Primary Citation of Related Structures:  
    7MFW

  • PubMed Abstract: 

    Embryogenesis requires cells to change shape and move without disrupting epithelial integrity. This requires robust, responsive linkage between adherens junctions and the actomyosin cytoskeleton. Using Drosophila morphogenesis, we define molecular mechanisms mediating junction-cytoskeletal linkage and explore the role of mechanosensing. We focus on the junction-cytoskeletal linker Canoe, a multidomain protein. We engineered the canoe locus to define how its domains mediate its mechanism of action. To our surprise, the PDZ and FAB domains, which we thought connected junctions and F-actin, are not required for viability or mechanosensitive recruitment to junctions under tension. The FAB domain stabilizes junctions experiencing elevated force, but in its absence, most cells recover, suggesting redundant interactions. In contrast, the Rap1-binding RA domains are critical for all Cno functions and enrichment at junctions under tension. This supports a model in which junctional robustness derives from a large protein network assembled via multivalent interactions, with proteins at network nodes and some node connections more critical than others.


  • Organizational Affiliation

    Curriculum in Genetics and Molecular Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Canoe,Echinoid
A, B
104Drosophila melanogasterMutation(s): 0 
Gene Names: 
UniProt
Find proteins for Q9BN17 (Drosophila melanogaster)
Explore Q9BN17 
Go to UniProtKB:  Q9BN17
Find proteins for Q9VN82 (Drosophila melanogaster)
Explore Q9VN82 
Go to UniProtKB:  Q9VN82
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupsQ9BN17Q9VN82
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.192 
  • R-Value Observed: 0.196 
  • Space Group: P 6
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 114.563α = 90
b = 114.563β = 90
c = 31.637γ = 120
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data scaling
PHENIXphasing
PDB_EXTRACTdata extraction
HKL-2000data reduction

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesR35GM118096
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesT32GM008570

Revision History  (Full details and data files)

  • Version 1.0: 2021-11-10
    Type: Initial release
  • Version 1.1: 2021-12-01
    Changes: Database references
  • Version 1.2: 2023-10-18
    Changes: Data collection, Refinement description