The structure of the UDP-Glc/GlcNAc 4-epimerase from the human pathogen Yun, H.G., Jang, K.S., Tanaka, S., Clemons, W.M.
(2020) bioRxiv 
(2020) bioRxiv 
Experimental Data Snapshot
Starting Model: experimental
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(2020) bioRxiv 
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
UDP-glucose 4-epimerase | 344 | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 | Mutation(s): 2  Gene Names: gne, Cj1131c EC: 5.1.3.2 | ||
UniProt | |||||
Find proteins for Q0P9C3 (Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)) Explore Q0P9C3  Go to UniProtKB:  Q0P9C3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q0P9C3 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAD (Subject of Investigation/LOI) Query on NAD | C [auth A], H [auth B] | NICOTINAMIDE-ADENINE-DINUCLEOTIDE C21 H27 N7 O14 P2 BAWFJGJZGIEFAR-NNYOXOHSSA-N | |||
GOL Query on GOL | D [auth A] E [auth A] F [auth A] I [auth B] J [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
ACT Query on ACT | G [auth A], M [auth B] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 87.7 | α = 90 |
b = 87.7 | β = 90 |
c = 261.66 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
SCALA | data scaling |
PHASER | phasing |