7JIZ

ScDLH

PDB DOI: https://doi.org/10.2210/pdb7JIZ/pdb

Classification: HYDROLASE
Organism(s): Solimonas sp. K1W22B-7
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2020-07-24 Released: 2022-01-26
Deposition Author(s): Schnettler Fernandez, J.D.F., Campbell, E.C., Hollfelder, F.H.
Funding Organization(s): European Commission

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.85 Å
R-Value Free: 0.195
R-Value Work: 0.166
R-Value Observed: 0.167

Starting Model: experimental
View more details

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

ScDLH

Schnettler Fernandez, J.D.F., Campbell, E.C., Hollfelder, F.

To be published.

Macromolecule Content

Total Structure Weight: 54.06 kDa
Atom Count: 4,199
Modelled Residue Count: 478
Deposited Residue Count: 504
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Dienelactone hydrolase family protein	A, B	252	Solimonas sp. K1W22B-7	Mutation(s): 0 Gene Names: D0B54_07315
UniProt
Find proteins for A0A346MYW6 (Solimonas sp. K1W22B-7) Explore A0A346MYW6 Go to UniProtKB: A0A346MYW6
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A346MYW6
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.85 Å
R-Value Free: 0.195
R-Value Work: 0.166
R-Value Observed: 0.167
Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 43.55	α = 90
b = 123.604	β = 100.979
c = 46.655	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
DIALS	data reduction
Aimless	data scaling
MOLREP	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2022-01-26

Deposition Author(s):

Schnettler Fernandez, J.D.F.

Hollfelder, F.H.

Funding Organization	Location	Grant Number
European Commission	United Kingdom	695669

Revision History (Full details and data files)

Version 1.0: 2022-01-26
Type: Initial release
Version 1.1: 2023-10-18
Changes: Data collection, Refinement description

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.