7ECP

RNA duplex containing C-Ag-U

  • Classification: RNA
  • Organism(s): synthetic construct
  • Mutation(s): No 

  • Deposited: 2021-03-12 Released: 2022-03-16 
  • Deposition Author(s): Kondo, J., Tsudura, A.
  • Funding Organization(s): Ministry of Education, Culture, Sports, Science and Technology (Japan)

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.91 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.154 
  • R-Value Observed: 0.161 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history. 


Literature

RNA duplex containing C-Ag-U

Kondo, J., Tsudura, A.

To be published.

Macromolecules

Find similar nucleic acids by:  Sequence   |   3D Structure  

Entity ID: 1
MoleculeChains LengthOrganismImage
RNA (5'-R(*GP*GP*GP*CP*CP*CP*GP*GP*UP*CP*CP*C)-3')
A, B, C, D
12synthetic construct
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.91 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.154 
  • R-Value Observed: 0.161 
  • Space Group: I 4
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 88.968α = 90
b = 88.968β = 90
c = 33.326γ = 90
Software Package:
Software NamePurpose
XSCALEdata scaling
PHENIXrefinement
XDSdata reduction
PHASERphasing

Structure Validation

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View more in-depth experimental data
Entry History & Funding Information

Deposition Data

Funding OrganizationLocationGrant Number
Ministry of Education, Culture, Sports, Science and Technology (Japan)Japan24245037

Revision History  (Full details and data files)

  • Version 1.0: 2022-03-16
    Type: Initial release
  • Version 1.1: 2024-05-29
    Changes: Data collection