Crystal structure of bacterial L-arabinose 1-dehydrogenase in complex with L-arabinose and NADP+
Yoshiwara, K., Watanabe, S., Watanabe, Y.(2020) Biochem Biophys Res Commun 530: 203-208
Experimental Data Snapshot
Starting Model: experimental
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(2020) Biochem Biophys Res Commun 530: 203-208
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
L-arabinose 1-dehydrogenase (NAD(P)(+)) | 319 | Azospirillum brasilense | Mutation(s): 1  Gene Names: araA EC: 1.1.1.376 (PDB Primary Data), 1.1.1.120 (PDB Primary Data), 1.1.1.48 (PDB Primary Data) | ![]() | |
UniProt | |||||
Find proteins for Q53TZ2 (Azospirillum brasilense) Explore Q53TZ2  Go to UniProtKB:  Q53TZ2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q53TZ2 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAP (Subject of Investigation/LOI) Query on NAP | E [auth A], H [auth B], I [auth C], J [auth D] | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C21 H28 N7 O17 P3 XJLXINKUBYWONI-NNYOXOHSSA-N | |||
GOL Query on GOL | F [auth A], G [auth A], K [auth D] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 59.857 | α = 90 |
b = 90.52 | β = 101.93 |
c = 134.693 | γ = 90 |
Software Name | Purpose |
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XDS | data processing |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
PHASER | phasing |