7BV0 | pdb_00007bv0

HEV-C E2s

PDB DOI: https://doi.org/10.2210/pdb7BV0/pdb

Classification: VIRAL PROTEIN
Organism(s): Paslahepevirus balayani
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2020-04-08 Released: 2020-05-06
Deposition Author(s): Bai, C.Z., Qi, J.X.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.80 Å
R-Value Free:
0.188 (Depositor), 0.192 (DCC)
R-Value Work:
0.171 (Depositor), 0.173 (DCC)
R-Value Observed:
0.172 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

Validation slider image for 7BV0

This is version 1.1 of the entry. See complete history.

Literature

Structure of emerging human-infected hepatitis E virus E2s at 1.8 Angstroms resolution

Bai, C.Z., Qi, J.X., Wang, Q.H.

To be published.

Macromolecule Content

Total Structure Weight: 25.77 kDa
Atom Count: 1,424
Modeled Residue Count: 151
Deposited Residue Count: 239
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Protein ORF2	A	239	Paslahepevirus balayani	Mutation(s): 0
UniProt
Find proteins for A0A3G1TVH2 (Hepatitis E virus) Explore A0A3G1TVH2 Go to UniProtKB: A0A3G1TVH2
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A3G1TVH2
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.80 Å
R-Value Free: 0.188 (Depositor), 0.192 (DCC)
R-Value Work: 0.171 (Depositor), 0.173 (DCC)
R-Value Observed: 0.172 (Depositor)

Space Group: P 6₃ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 107.66	α = 90
b = 107.66	β = 90
c = 75.458	γ = 120

Software Package:

Software Name	Purpose
HKL-2000	data scaling
PHENIX	refinement
PDB_EXTRACT	data extraction
HKL-2000	data reduction
PHASER	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2020-05-06

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2020-05-06
Type: Initial release
Version 1.1: 2023-11-29
Changes: Data collection, Database references, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.