Hydroxynitrile lyase from Parafonteria laminate complexed with benzaldehyde prepared by cocrystallization
Nuylert, A., Nakabayashi, M., Yamaguchi, T., Asano, Y.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Hydroxynitrile lyase | 164 | Parafontaria laminata | Mutation(s): 0  | ![]() | |
UniProt | |||||
Find proteins for A0A7I6N400 (Parafontaria laminata) Explore A0A7I6N400  Go to UniProtKB:  A0A7I6N400 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A7I6N400 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
HBX (Subject of Investigation/LOI) Query on HBX | C [auth A], D [auth A], H [auth B], I [auth B] | benzaldehyde C7 H6 O HUMNYLRZRPPJDN-UHFFFAOYSA-N | |||
EDO Query on EDO | G [auth A], L [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
SCN (Subject of Investigation/LOI) Query on SCN | E [auth A], F [auth A], J [auth B], K [auth B] | THIOCYANATE ION C N S ZMZDMBWJUHKJPS-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
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a = 56.934 | α = 90 |
b = 32.763 | β = 102.84 |
c = 84.632 | γ = 90 |
Software Name | Purpose |
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XDS | data reduction |
SCALA | data scaling |
MOLREP | phasing |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
Funding Organization | Location | Grant Number |
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Japan Science and Technology | Japan | JPMJER1102 |
Japan Society for the Promotion of Science (JSPS) | Japan | 17H06169 |