6YDP

55S mammalian mitochondrial ribosome with mtEFG1 and P site fMet-tRNAMet (POST)


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Structural insights into mammalian mitochondrial translation elongation catalyzed by mtEFG1.

Kummer, E.Ban, N.

(2020) EMBO J 39: e104820-e104820

  • DOI: https://doi.org/10.15252/embj.2020104820
  • Primary Citation of Related Structures:  
    6YDP, 6YDW

  • PubMed Abstract: 

    Mitochondria are eukaryotic organelles of bacterial origin where respiration takes place to produce cellular chemical energy. These reactions are catalyzed by the respiratory chain complexes located in the inner mitochondrial membrane. Notably, key components of the respiratory chain complexes are encoded on the mitochondrial chromosome and their expression relies on a dedicated mitochondrial translation machinery. Defects in the mitochondrial gene expression machinery lead to a variety of diseases in humans mostly affecting tissues with high energy demand such as the nervous system, the heart, or the muscles. The mitochondrial translation system has substantially diverged from its bacterial ancestor, including alterations in the mitoribosomal architecture, multiple changes to the set of translation factors and striking reductions in otherwise conserved tRNA elements. Although a number of structures of mitochondrial ribosomes from different species have been determined, our mechanistic understanding of the mitochondrial translation cycle remains largely unexplored. Here, we present two cryo-EM reconstructions of human mitochondrial elongation factor G1 bound to the mammalian mitochondrial ribosome at two different steps of the tRNA translocation reaction during translation elongation. Our structures explain the mechanism of tRNA and mRNA translocation on the mitoribosome, the regulation of mtEFG1 activity by the ribosomal GTPase-associated center, and the basis of decreased susceptibility of mtEFG1 to the commonly used antibiotic fusidic acid.


  • Organizational Affiliation

    Department of Biology, Institute of Molecular Biology and Biophysics, Swiss Federal Institute of Technology Zurich, Zurich, Switzerland.


Macromolecules

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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L27A [auth B0]148Sus scrofaMutation(s): 0 
UniProt
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UniProt GroupA0A4X1U0F6
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L20B [auth BU]149Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A286ZU56 (Sus scrofa)
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L21C [auth BV]209Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1RY70 (Sus scrofa)
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
uL22mD [auth BW]210Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A4X1TXR4 (Sus scrofa)
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UniProt GroupA0A4X1TXR4
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
uL23mE [auth BX]150Sus scrofaMutation(s): 0 
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
uL24mF [auth BY]216Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L37G [auth Ba]423Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287BIV6 (Sus scrofa)
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L38H [auth Bb]380Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1RW03 (Sus scrofa)
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L39I [auth Bc]334Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1SHP6 (Sus scrofa)
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
Uncharacterized proteinJ [auth Bd]206Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A286ZP98 (Sus scrofa)
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L41K [auth Be]135Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A8D1F1K9 (Sus scrofa)
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
mL42L [auth Bf]142Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287BQA1 (Sus scrofa)
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L43M [auth Bg]159Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1S8U4 (Sus scrofa)
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Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
mL44N [auth Bh]332Sus scrofaMutation(s): 0 
UniProt
Find proteins for F1SR64 (Sus scrofa)
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Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L45O [auth Bi]306Sus scrofaMutation(s): 0 
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Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L46P [auth Bj]279Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein L48, mitochondrialQ [auth Bk]269Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A480J9Z6 (Sus scrofa)
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Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
Mrpl34R [auth Bl]166Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A0R4J8D6 (Sus scrofa)
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Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L50S [auth Bm]198Sus scrofaMutation(s): 0 
UniProt
Find proteins for I3L9H6 (Sus scrofa)
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Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L51T [auth Bn]128Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A8D1P1C8 (Sus scrofa)
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Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
mL52U [auth Bo]124Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 22
MoleculeChains Sequence LengthOrganismDetailsImage
mL53V [auth Bp]112Sus scrofaMutation(s): 0 
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Entity ID: 23
MoleculeChains Sequence LengthOrganismDetailsImage
mL54W [auth Bq]138Sus scrofaMutation(s): 0 
UniProt
Find proteins for I3LN63 (Sus scrofa)
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Entity ID: 24
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L57X [auth Bt]102Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287BP93 (Sus scrofa)
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Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
mL62 (ICT1)Y [auth Bu]205Sus scrofaMutation(s): 0 
EC: 3.1.1.29
UniProt
Find proteins for A0A286ZJR2 (Sus scrofa)
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Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
mL64Z [auth Bv]222Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A286ZXA6 (Sus scrofa)
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Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
39S ribosomal protein S30, mitochondrialAA [auth Bw]433Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L28BA [auth B1]256Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A286ZTW8 (Sus scrofa)
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Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S18ACA [auth Bx]196Sus scrofaMutation(s): 0 
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Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S2EA [auth AB]289Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S24FA [auth AC]167Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287ANU4 (Sus scrofa)
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Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S5GA [auth AE]430Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
bS6mHA [auth AF]276Sus scrofaMutation(s): 0 
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Entity ID: 35
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S7IA [auth AG]242Sus scrofaMutation(s): 0 
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Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
uS9mJA [auth AI]397Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S10KA [auth AJ]200Sus scrofaMutation(s): 0 
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Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
uS11mLA [auth AK]196Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S12MA [auth AL]139Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S14NA [auth AN]128Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
uS15mOA [auth AO]239Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287BMP0 (Sus scrofa)
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Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S16, mitochondrialPA [auth AP]135Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
uS17mQA [auth AQ]130Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S18CRA [auth AR]143Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 45
MoleculeChains Sequence LengthOrganismDetailsImage
bS21mSA [auth AU]87Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 48
MoleculeChains Sequence LengthOrganismDetailsImage
unknown peptideVA [auth AZ]18Sus scrofaMutation(s): 0 
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Entity ID: 49
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S22WA [auth Aa]382Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A287AQT5 (Sus scrofa)
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Entity ID: 50
MoleculeChains Sequence LengthOrganismDetailsImage
mS23XA [auth Ab]190Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 51
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S25YA [auth Ac]173Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 52
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S26ZA [auth Ad]205Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 53
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S27AB [auth Ae]426Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 54
MoleculeChains Sequence LengthOrganismDetailsImage
Mitoribosomal protein ms28, mrps28BB [auth Af]188Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 55
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L47CB [auth B2]252Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 56
MoleculeChains Sequence LengthOrganismDetailsImage
Death associated protein 3DB [auth Ag]410Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 57
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S31EB [auth Ah]387Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 58
MoleculeChains Sequence LengthOrganismDetailsImage
mS33FB [auth Ai]106Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 59
MoleculeChains Sequence LengthOrganismDetailsImage
mS34GB [auth Aj]218Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 60
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein S35HB [auth Ak]325Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 61
MoleculeChains Sequence LengthOrganismDetailsImage
mS37IB [auth Am]118Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 62
MoleculeChains Sequence LengthOrganismDetailsImage
Aurora kinase A interacting protein 1JB [auth An]199Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 63
MoleculeChains Sequence LengthOrganismDetailsImage
Pentatricopeptide repeat domain 3KB [auth Ao]699Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 64
MoleculeChains Sequence LengthOrganismDetailsImage
28S ribosomal protein S18b, mitochondrialLB [auth Ap]258Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 65
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L12198Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 66
MoleculeChains Sequence LengthOrganismDetailsImage
uL30mTB [auth B3]161Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 67
MoleculeChains Sequence LengthOrganismDetailsImage
bL31mUB [auth B4]126Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 68
MoleculeChains Sequence LengthOrganismDetailsImage
bL32mVB [auth B5]188Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 69
MoleculeChains Sequence LengthOrganismDetailsImage
bL33mWB [auth B6]65Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 70
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L34XB [auth B7]95Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 71
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L35YB [auth B8]188Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 72
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal proteinZB [auth B9]100Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 74
MoleculeChains Sequence LengthOrganismDetailsImage
Elongation factor G, mitochondrialCC [auth BC]722Homo sapiensMutation(s): 0 
Gene Names: GFM1EFGEFG1GFM
UniProt & NIH Common Fund Data Resources
Find proteins for Q96RP9 (Homo sapiens)
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PHAROS:  Q96RP9
GTEx:  ENSG00000168827 
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Entity ID: 75
MoleculeChains Sequence LengthOrganismDetailsImage
uL2mDC [auth BD]306Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 76
MoleculeChains Sequence LengthOrganismDetailsImage
ICT1EC [auth BE]348Sus scrofaMutation(s): 0 
UniProt
Find proteins for A0A140UHW4 (Sus scrofa)
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Entity ID: 77
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L4FC [auth BF]294Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 78
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L9GC [auth BI]268Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 79
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L10HC [auth BJ]262Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 80
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L11IC [auth BK]192Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 81
MoleculeChains Sequence LengthOrganismDetailsImage
uL13mJC [auth BN]178Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 82
MoleculeChains Sequence LengthOrganismDetailsImage
uL14mKC [auth BO]145Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 83
MoleculeChains Sequence LengthOrganismDetailsImage
uL15mLC [auth BP]296Sus scrofaMutation(s): 0 
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Entity ID: 84
MoleculeChains Sequence LengthOrganismDetailsImage
uL16mMC [auth BQ]251Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 85
MoleculeChains Sequence LengthOrganismDetailsImage
Uncharacterized proteinNC [auth BR]169Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 86
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L18OC [auth BS]180Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 87
MoleculeChains Sequence LengthOrganismDetailsImage
Mitochondrial ribosomal protein L19PC [auth BT]292Sus scrofaMutation(s): 0 
UniProt
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Entity ID: 30
MoleculeChains LengthOrganismImage
12S rRNAAC [auth BA],
DA [auth AA]
16,770Sus scrofa
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Entity ID: 46
MoleculeChains LengthOrganismImage
fMet-tRNAMet (P site)TA [auth AV]71Homo sapiens
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Entity ID: 47
MoleculeChains LengthOrganismImage
mRNAUA [auth AX]6Homo sapiens
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Entity ID: 73
MoleculeChains LengthOrganismImage
CP tRNAPheBC [auth BB]73Sus scrofa
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Small Molecules
Ligands 7 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
GTP
Query on GTP

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ZG [auth Ag]GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
GNP (Subject of Investigation/LOI)
Query on GNP

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JP [auth BC]PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
C10 H17 N6 O13 P3
UQABYHGXWYXDTK-UUOKFMHZSA-N
5GP
Query on 5GP

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EP [auth BA],
FP [auth BA]
GUANOSINE-5'-MONOPHOSPHATE
C10 H14 N5 O8 P
RQFCJASXJCIDSX-UUOKFMHZSA-N
SPM
Query on SPM

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GP [auth BA],
HP [auth BA],
VC [auth AA]
SPERMINE
C10 H26 N4
PFNFFQXMRSDOHW-UHFFFAOYSA-N
FME (Subject of Investigation/LOI)
Query on FME

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WG [auth AV]N-FORMYLMETHIONINE
C6 H11 N O3 S
PYUSHNKNPOHWEZ-YFKPBYRVSA-N
ZN
Query on ZN

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DH [auth Ap]
FH [auth B5]
GH [auth B9]
UC [auth Bx]
VG [auth AR]
DH [auth Ap],
FH [auth B5],
GH [auth B9],
UC [auth Bx],
VG [auth AR],
YG [auth Ac]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
MG
Query on MG

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AD [auth AA]
AE [auth AA]
AF [auth AA]
AG [auth AA]
AH [auth Ag]
AD [auth AA],
AE [auth AA],
AF [auth AA],
AG [auth AA],
AH [auth Ag],
AI [auth BA],
AJ [auth BA],
AK [auth BA],
AL [auth BA],
AM [auth BA],
AN [auth BA],
AO [auth BA],
AP [auth BA],
BD [auth AA],
BE [auth AA],
BF [auth AA],
BG [auth AA],
BH [auth Am],
BI [auth BA],
BJ [auth BA],
BK [auth BA],
BL [auth BA],
BM [auth BA],
BN [auth BA],
BO [auth BA],
BP [auth BA],
CD [auth AA],
CE [auth AA],
CF [auth AA],
CG [auth AA],
CH [auth An],
CI [auth BA],
CJ [auth BA],
CK [auth BA],
CL [auth BA],
CM [auth BA],
CN [auth BA],
CO [auth BA],
CP [auth BA],
DD [auth AA],
DE [auth AA],
DF [auth AA],
DG [auth AA],
DI [auth BA],
DJ [auth BA],
DK [auth BA],
DL [auth BA],
DM [auth BA],
DN [auth BA],
DO [auth BA],
DP [auth BA],
ED [auth AA],
EE [auth AA],
EF [auth AA],
EG [auth AA],
EH [auth B3],
EI [auth BA],
EJ [auth BA],
EK [auth BA],
EL [auth BA],
EM [auth BA],
EN [auth BA],
EO [auth BA],
FD [auth AA],
FE [auth AA],
FF [auth AA],
FG [auth AA],
FI [auth BA],
FJ [auth BA],
FK [auth BA],
FL [auth BA],
FM [auth BA],
FN [auth BA],
FO [auth BA],
GD [auth AA],
GE [auth AA],
GF [auth AA],
GG [auth AA],
GI [auth BA],
GJ [auth BA],
GK [auth BA],
GL [auth BA],
GM [auth BA],
GN [auth BA],
GO [auth BA],
HD [auth AA],
HE [auth AA],
HF [auth AA],
HG [auth AA],
HH [auth BA],
HI [auth BA],
HJ [auth BA],
HK [auth BA],
HL [auth BA],
HM [auth BA],
HN [auth BA],
HO [auth BA],
ID [auth AA],
IE [auth AA],
IF [auth AA],
IG [auth AA],
IH [auth BA],
II [auth BA],
IJ [auth BA],
IK [auth BA],
IL [auth BA],
IM [auth BA],
IN [auth BA],
IO [auth BA],
IP [auth BB],
JD [auth AA],
JE [auth AA],
JF [auth AA],
JG [auth AA],
JH [auth BA],
JI [auth BA],
JJ [auth BA],
JK [auth BA],
JL [auth BA],
JM [auth BA],
JN [auth BA],
JO [auth BA],
KD [auth AA],
KE [auth AA],
KF [auth AA],
KG [auth AA],
KH [auth BA],
KI [auth BA],
KJ [auth BA],
KK [auth BA],
KL [auth BA],
KM [auth BA],
KN [auth BA],
KO [auth BA],
KP [auth BC],
LD [auth AA],
LE [auth AA],
LF [auth AA],
LG [auth AA],
LH [auth BA],
LI [auth BA],
LJ [auth BA],
LK [auth BA],
LL [auth BA],
LM [auth BA],
LN [auth BA],
LO [auth BA],
LP [auth BD],
MD [auth AA],
ME [auth AA],
MF [auth AA],
MG [auth AA],
MH [auth BA],
MI [auth BA],
MJ [auth BA],
MK [auth BA],
ML [auth BA],
MM [auth BA],
MN [auth BA],
MO [auth BA],
MP [auth BD],
ND [auth AA],
NE [auth AA],
NF [auth AA],
NG [auth AA],
NH [auth BA],
NI [auth BA],
NJ [auth BA],
NK [auth BA],
NL [auth BA],
NM [auth BA],
NN [auth BA],
NO [auth BA],
NP [auth BD],
OD [auth AA],
OE [auth AA],
OF [auth AA],
OG [auth AA],
OH [auth BA],
OI [auth BA],
OJ [auth BA],
OK [auth BA],
OL [auth BA],
OM [auth BA],
ON [auth BA],
OO [auth BA],
OP [auth BP],
PD [auth AA],
PE [auth AA],
PF [auth AA],
PG [auth AA],
PH [auth BA],
PI [auth BA],
PJ [auth BA],
PK [auth BA],
PL [auth BA],
PM [auth BA],
PN [auth BA],
PO [auth BA],
PP [auth BP],
QC [auth B0],
QD [auth AA],
QE [auth AA],
QF [auth AA],
QG [auth AA],
QH [auth BA],
QI [auth BA],
QJ [auth BA],
QK [auth BA],
QL [auth BA],
QM [auth BA],
QN [auth BA],
QO [auth BA],
QP [auth BQ],
RC [auth Be],
RD [auth AA],
RE [auth AA],
RF [auth AA],
RG [auth AA],
RH [auth BA],
RI [auth BA],
RJ [auth BA],
RK [auth BA],
RL [auth BA],
RM [auth BA],
RN [auth BA],
RO [auth BA],
RP [auth BR],
SC [auth Bl],
SD [auth AA],
SE [auth AA],
SF [auth AA],
SG [auth AA],
SH [auth BA],
SI [auth BA],
SJ [auth BA],
SK [auth BA],
SL [auth BA],
SM [auth BA],
SN [auth BA],
SO [auth BA],
TC [auth Bt],
TD [auth AA],
TE [auth AA],
TF [auth AA],
TG [auth AB],
TH [auth BA],
TI [auth BA],
TJ [auth BA],
TK [auth BA],
TL [auth BA],
TM [auth BA],
TN [auth BA],
TO [auth BA],
UD [auth AA],
UE [auth AA],
UF [auth AA],
UG [auth AL],
UH [auth BA],
UI [auth BA],
UJ [auth BA],
UK [auth BA],
UL [auth BA],
UM [auth BA],
UN [auth BA],
UO [auth BA],
VD [auth AA],
VE [auth AA],
VF [auth AA],
VH [auth BA],
VI [auth BA],
VJ [auth BA],
VK [auth BA],
VL [auth BA],
VM [auth BA],
VN [auth BA],
VO [auth BA],
WC [auth AA],
WD [auth AA],
WE [auth AA],
WF [auth AA],
WH [auth BA],
WI [auth BA],
WJ [auth BA],
WK [auth BA],
WL [auth BA],
WM [auth BA],
WN [auth BA],
WO [auth BA],
XC [auth AA],
XD [auth AA],
XE [auth AA],
XF [auth AA],
XG [auth AX],
XH [auth BA],
XI [auth BA],
XJ [auth BA],
XK [auth BA],
XL [auth BA],
XM [auth BA],
XN [auth BA],
XO [auth BA],
YC [auth AA],
YD [auth AA],
YE [auth AA],
YF [auth AA],
YH [auth BA],
YI [auth BA],
YJ [auth BA],
YK [auth BA],
YL [auth BA],
YM [auth BA],
YN [auth BA],
YO [auth BA],
ZC [auth AA],
ZD [auth AA],
ZE [auth AA],
ZF [auth AA],
ZH [auth BA],
ZI [auth BA],
ZJ [auth BA],
ZK [auth BA],
ZL [auth BA],
ZM [auth BA],
ZN [auth BA],
ZO [auth BA]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
European Molecular Biology Organization (EMBO)Switzerland1196-2014
Swiss National Science FoundationSwitzerland310030B_163478
Swiss National Science FoundationSwitzerland138262

Revision History  (Full details and data files)

  • Version 1.0: 2020-07-15
    Type: Initial release
  • Version 1.1: 2020-08-12
    Changes: Database references, Derived calculations
  • Version 1.2: 2024-10-23
    Changes: Data collection, Database references, Structure summary