Download MendeleyThe structure of the triclinic crystal form of beef liver catalase at 1.85 A resolution
McPherson, A.To be published.
6PO0
The structure of the orthorhombic (P212121) crystal form of beef liver catalase at 1.85 A resolution
- PDB DOI: https://doi.org/10.2210/pdb6PO0/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Bos taurus
- Expression System: Bos taurus
- Mutation(s): Yes
- Deposited: 2019-07-03 Released: 2020-05-20
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.75 Å
- R-Value Free: 0.207
- R-Value Work: 0.173
- R-Value Observed: 0.175
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Catalase | 527 | Bos taurus | Mutation(s): 2 Gene Names: CAT EC: 1.11.1.6 |  | |
UniProt | |||||
Find proteins for P00432 (Bos taurus) Explore P00432 Go to UniProtKB: P00432 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P00432 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NDP Query on NDP | F [auth A], H [auth B], J [auth C], L [auth D] | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C21 H30 N7 O17 P3 ACFIXJIJDZMPPO-NNYOXOHSSA-N |  | ||
| HEM Query on HEM | E [auth A], G [auth B], I [auth C], K [auth D] | PROTOPORPHYRIN IX CONTAINING FE C34 H32 Fe N4 O4 KABFMIBPWCXCRK-RGGAHWMASA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.75 Å
- R-Value Free: 0.207
- R-Value Work: 0.173
- R-Value Observed: 0.175
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 83.984 | α = 90 |
| b = 140.386 | β = 90 |
| c = 228.177 | γ = 90 |
| Software Name | Purpose |
|---|---|
| XDS | data reduction |
| Aimless | data scaling |
| PHASER | phasing |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
Entry History
Deposition Data
- Released Date: 2020-05-20 Deposition Author(s): McPherson, A.
Revision History (Full details and data files)
- Version 1.0: 2020-05-20
Type: Initial release - Version 1.1: 2024-03-13
Changes: Data collection, Database references, Derived calculations, Refinement description
