Crystal structure of yak lactoperoxidase at 2.27 A resolution
Singh, P.K., Viswanathan, V., Sharma, P., Rani, C., Sharma, S., Singh, T.P.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Lactoperoxidase | 595 | Bos mutus | Mutation(s): 0  EC: 1.11.1.7 | ||
UniProt | |||||
Find proteins for P80025 (Bos taurus) Explore P80025  Go to UniProtKB:  P80025 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P80025 | ||||
Glycosylation | |||||
Glycosylation Sites: 4 | |||||
Sequence AnnotationsExpand | |||||
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Ligands 7 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
HEM (Subject of Investigation/LOI) Query on HEM | G [auth A] | PROTOPORPHYRIN IX CONTAINING FE C34 H32 Fe N4 O4 KABFMIBPWCXCRK-RGGAHWMASA-L | |||
NAG (Subject of Investigation/LOI) Query on NAG | B [auth A], C [auth A], D [auth A], E [auth A] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N | |||
IOD Query on IOD | H [auth A] I [auth A] J [auth A] K [auth A] L [auth A] | IODIDE ION I XMBWDFGMSWQBCA-UHFFFAOYSA-M | |||
OSM (Subject of Investigation/LOI) Query on OSM | U [auth A], V [auth A], W [auth A], X [auth A] | 1-(OXIDOSULFANYL)METHANAMINE C H5 N O S KONFWJXIYYGXOO-UHFFFAOYSA-N | |||
SCN Query on SCN | AA [auth A], BA [auth A], Y [auth A], Z [auth A] | THIOCYANATE ION C N S ZMZDMBWJUHKJPS-UHFFFAOYSA-M | |||
CA Query on CA | F [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
PEO Query on PEO | CA [auth A] | HYDROGEN PEROXIDE H2 O2 MHAJPDPJQMAIIY-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
SEP Query on SEP | A | L-PEPTIDE LINKING | C3 H8 N O6 P | SER |
Length ( Å ) | Angle ( ˚ ) |
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a = 54.08 | α = 90 |
b = 80.64 | β = 102.8 |
c = 76.13 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
iMOSFLM | data reduction |
Aimless | data scaling |
MOLREP | phasing |