Structural insights into high stability of cytochrome c551 from a deep-sea piezo-tolerant bacterium, Pseudomonas sp. strain MT-1
Fujii, S., Oki, H., Kawahara, K., Ohkubo, T., Masanari-Fujii, M., Wakai, S., Sambongi, Y.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cytochrome C biogenesis protein CcsA | 82 | Pseudomonas sp. | Mutation(s): 0 Gene Names: CMK99_21520, CML01_09540, DD989_05085 | ||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
HEC (Subject of Investigation/LOI) Query on HEC | E [auth A], I [auth B] | HEME C C34 H34 Fe N4 O4 HXQIYSLZKNYNMH-LJNAALQVSA-N | |||
ZN Query on ZN | C [auth A], D [auth A], F [auth B], G [auth B], H [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 50.787 | α = 90 |
b = 52.017 | β = 90 |
c = 62.393 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
XDS | data scaling |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
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Japan Society for the Promotion of Science | Japan | 25-1446 |
Ministry of Education, Culture, Sports, Science and Technology (Japan) | Japan | 26240045 |