Structural insights in human glycine decarboxylase and comparison with the Neanderthal variant
Van Laer, B., Kapp, U., Signor, L., Leonard, G., Mueller-Dieckmann, C.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Glycine dehydrogenase (decarboxylating), mitochondrial | 984 | Homo sapiens | Mutation(s): 0  Gene Names: GLDC, GCSP EC: 1.4.4.2 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P23378 (Homo sapiens) Explore P23378  Go to UniProtKB:  P23378 | |||||
PHAROS:  P23378 GTEx:  ENSG00000178445  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P23378 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PLP (Subject of Investigation/LOI) Query on PLP | C [auth A], J [auth B] | PYRIDOXAL-5'-PHOSPHATE C8 H10 N O6 P NGVDGCNFYWLIFO-UHFFFAOYSA-N | |||
EDO Query on EDO | D [auth A] E [auth A] F [auth A] G [auth A] H [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
BCT Query on BCT | I [auth A] | BICARBONATE ION C H O3 BVKZGUZCCUSVTD-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 85.81 | α = 90 |
b = 123.51 | β = 97.87 |
c = 99.51 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
XDS | data reduction |
XSCALE | data scaling |
PHASER | phasing |