6CHX | pdb_00006chx

High Resolution Crystal Structure of the Hemagglutinin H1 Head Domain of Influenza A virus Solomon Islands

PDB DOI: https://doi.org/10.2210/pdb6CHX/pdb

Classification: VIRAL PROTEIN
Organism(s): Influenza A virus (A/Juliaca/FLU3969/2006(H1N1))
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2018-02-23 Released: 2019-02-27
Deposition Author(s): Dong, J., Sevy, A.M., Crowe, J.E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.40 Å
R-Value Free:
0.211 (Depositor), 0.210 (DCC)
R-Value Work:
0.174 (Depositor), 0.174 (DCC)
R-Value Observed:
0.175 (Depositor)

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This is version 1.1 of the entry. See complete history.

Literature

High Resolution Crystal Structure of the Hemagglutinin H1 Head Domain of Influenza A virus Solomon Islands

Dong, J., Sevy, A.M., Crowe, J.E.

To be published.

Macromolecule Content

Total Structure Weight: 48.59 kDa
Atom Count: 4,007
Modeled Residue Count: 420
Deposited Residue Count: 430
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Hemagglutinin	A, B	215	Influenza A virus (A/Juliaca/FLU3969/2006(H1N1))	Mutation(s): 0
UniProt
Find proteins for D1MNG6 (Influenza A virus) Explore D1MNG6 Go to UniProtKB: D1MNG6
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	D1MNG6
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.40 Å
R-Value Free: 0.211 (Depositor), 0.210 (DCC)
R-Value Work: 0.174 (Depositor), 0.174 (DCC)
R-Value Observed: 0.175 (Depositor)

Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 159.315	α = 90
b = 30.575	β = 114.69
c = 78.718	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
Aimless	data scaling
PHASER	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2019-02-27

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2019-02-27
Type: Initial release
Version 1.1: 2024-11-20
Changes: Data collection, Database references, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.