5IB0 | pdb_00005ib0

PA4534: acetyl CoA complex

PDB DOI: https://doi.org/10.2210/pdb5IB0/pdb

Classification: TRANSFERASE
Organism(s): Pseudomonas aeruginosa PAO1
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2016-02-22 Released: 2017-03-15
Deposition Author(s): Choe, J., Shin, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.65 Å
R-Value Free:
0.207 (Depositor), 0.215 (DCC)
R-Value Work:
0.193 (Depositor), 0.203 (DCC)
R-Value Observed:
0.194 (Depositor)

wwPDB Validation 3D Report Full Report

Ligand Structure Quality Assessment

This is version 1.1 of the entry. See complete history.

Literature

Structure of PA4534

Choe, J., Shin, S.

To be published.

Macromolecule Content

Total Structure Weight: 112.96 kDa
Atom Count: 8,678
Modeled Residue Count: 959
Deposited Residue Count: 959
Unique protein chains: 1

Macromolecules

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| 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein PA4534	A, B, C, D, E A, B, C, D, E, F, G	137	Pseudomonas aeruginosa PAO1	Mutation(s): 0 Gene Names: PA4534
UniProt
Find proteins for Q9HVP3 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore Q9HVP3 Go to UniProtKB: Q9HVP3
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9HVP3
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ACO Query on ACO Download:Ideal Coordinates CCD File SDF format, chain N [auth B] SDF format, chain S [auth G] SDF format, chain P [auth C] SDF format, chain H [auth A] MOL2 format, chain N [auth B] MOL2 format, chain S [auth G] MOL2 format, chain P [auth C] MOL2 format, chain H [auth A] mmCIF format, chain N [auth B] mmCIF format, chain S [auth G] mmCIF format, chain P [auth C] mmCIF format, chain H [auth A]	H [auth A], N [auth B], P [auth C], S [auth G]	*ACETYL COENZYME A** C₂₃ H₃₈ N₇ O₁₇ P₃ S ZSLZBFCDCINBPY-ZSJPKINUSA-N		Interactions Focus chain H [auth A] Focus chain N [auth B] Focus chain P [auth C] Focus chain S [auth G] Interactions & Density Focus chain H [auth A] Focus chain N [auth B] Focus chain P [auth C] Focus chain S [auth G]
GOL Query on GOL Download:Ideal Coordinates CCD File SDF format, chain J [auth A] SDF format, chain K [auth A] SDF format, chain M [auth A] SDF format, chain Q [auth C] SDF format, chain U [auth G] SDF format, chain T [auth G] SDF format, chain R [auth D] SDF format, chain O [auth B] SDF format, chain L [auth A] SDF format, chain I [auth A] MOL2 format, chain J [auth A] MOL2 format, chain K [auth A] MOL2 format, chain M [auth A] MOL2 format, chain Q [auth C] MOL2 format, chain U [auth G] MOL2 format, chain T [auth G] MOL2 format, chain R [auth D] MOL2 format, chain O [auth B] MOL2 format, chain L [auth A] MOL2 format, chain I [auth A] mmCIF format, chain J [auth A] mmCIF format, chain K [auth A] mmCIF format, chain M [auth A] mmCIF format, chain Q [auth C] mmCIF format, chain U [auth G] mmCIF format, chain T [auth G] mmCIF format, chain R [auth D] mmCIF format, chain O [auth B] mmCIF format, chain L [auth A] mmCIF format, chain I [auth A]	I [auth A] J [auth A] K [auth A] L [auth A] M [auth A] I [auth A], J [auth A], K [auth A], L [auth A], M [auth A], O [auth B], Q [auth C], R [auth D], T [auth G], U [auth G]	GLYCEROL C₃ H₈ O₃ PEDCQBHIVMGVHV-UHFFFAOYSA-N		Interactions Focus chain I [auth A] Focus chain J [auth A] Focus chain K [auth A] Focus chain L [auth A] Focus chain M [auth A] Focus chain O [auth B] Focus chain Q [auth C] Focus chain R [auth D] Focus chain T [auth G] Focus chain U [auth G] Interactions & Density Focus chain I [auth A] Focus chain J [auth A] Focus chain K [auth A] Focus chain L [auth A] Focus chain M [auth A] Focus chain O [auth B] Focus chain Q [auth C] Focus chain R [auth D] Focus chain T [auth G] Focus chain U [auth G]