☰ Navigation Tabs
PA4534: acetyl CoA complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 293 15% polyethylene glycol (PEG) 3350, 0.2M Ammonium Citrate Dibasic, 0.1M Tris-HCl pH 7.5
Crystal Properties Matthews coefficient Solvent content 3.08 60.08
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 82.116 α = 90 b = 110.952 β = 90 c = 294.379 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2015-09-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PAL/PLS BEAMLINE 5C (4A) 1.0 PAL/PLS 5C (4A)
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.65 50 99.2 52.3 18.3 308660
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.65 50 150961 7981 99.22 0.19366 0.19298 0.2034 0.20676 0.2155 RANDOM 46.064
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.12 0.1 0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.912 r_dihedral_angle_3_deg 12.861 r_dihedral_angle_4_deg 11.309 r_long_range_B_refined 8.146 r_long_range_B_other 8.146 r_dihedral_angle_1_deg 5.476 r_scangle_other 4.465 r_scbond_it 3.054 r_scbond_other 3.054 r_mcangle_other 3.052
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.912 r_dihedral_angle_3_deg 12.861 r_dihedral_angle_4_deg 11.309 r_long_range_B_refined 8.146 r_long_range_B_other 8.146 r_dihedral_angle_1_deg 5.476 r_scangle_other 4.465 r_scbond_it 3.054 r_scbond_other 3.054 r_mcangle_other 3.052 r_mcangle_it 3.051 r_mcbond_it 2.046 r_mcbond_other 2.027 r_angle_other_deg 1.96 r_angle_refined_deg 1.831 r_chiral_restr 0.102 r_bond_refined_d 0.014 r_bond_other_d 0.011 r_gen_planes_refined 0.011 r_gen_planes_other 0.009 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7665 Nucleic Acid Atoms Solvent Atoms 653 Heterogen Atoms 264
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling MOLREP phasing