5Y0U | pdb_00005y0u

The solution structure of AEBP2 C2H2 zinc fingers

• PDB DOI: https://doi.org/10.2210/pdb5Y0U/pdb

• Classification: METAL BINDING PROTEIN
• Organism(s): Homo sapiens
• Expression System: Escherichia coli 'BL21-Gold(DE3)pLysS AG
• Mutation(s): No 


• Deposited: 2017-07-18 Released: 2018-08-01 
• Deposition Author(s): Sun, A., Shi, Y., Wu, J.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Literature

Structural and biochemical insights into human zinc finger protein AEBP2 reveals interactions with RBBP4.

Sun, A., Li, F., Liu, Z., Jiang, Y., Zhang, J., Wu, J., Shi, Y.

(2018) Protein Cell 9: 738-742

• PubMed: 29134516 
• DOI: https://doi.org/10.1007/s13238-017-0483-6
• Primary Citation Related Structures: 
  5Y0U, 5Y1U

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Organizational Affiliation: 
• Hefei National Laboratory for Physical Sciences at Microscale and School of Life Sciences, University of Science and Technology of China, Hefei, 230027, China.
Hefei National Laboratory for Physical Sciences at Microscale and School of Life Sciences, University of Science and Technology of China, Hefei, 230027, China. [e-mail].

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 12.38 kDa 
• Atom Count: 855 
• Modeled Residue Count: 109 
• Deposited Residue Count: 109 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Zinc finger protein AEBP2	A	109	Homo sapiens	Mutation(s): 0  Gene Names: AEBP2
UniProt & NIH Common Fund Data Resources
Find proteins for Q6ZN18 (Homo sapiens) Explore Q6ZN18  Go to UniProtKB:  Q6ZN18
PHAROS:  Q6ZN18 GTEx:  ENSG00000139154

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	B [auth A], C [auth A], D [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2018-08-01 
Deposition Author(s): Sun, A., Shi, Y., Wu, J.

Revision History  

• Version 1.0: 2018-08-01
  Type: Initial release
  
• Version 1.1: 2023-06-14
  Changes: Data collection, Database references, Other
• Version 1.2: 2024-05-15
  Changes: Data collection, Database references