Crystal structure of capping enzyme from Rice dwarf virus
Nakamichi, Y., Higashiura, A., Narita, H., Hagiwara, K., Uehara-Ichiki, T., Omura, T., Nakagawa, A.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
mRNA capping enzyme P5 | A, B [auth C], C [auth D], D [auth B] | 804 | Rice dwarf virus (isolate O) | Mutation(s): 0  EC: 2.7.7.50 | |
UniProt | |||||
Find proteins for P14583 (Rice dwarf virus (isolate Akita)) Explore P14583  Go to UniProtKB:  P14583 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P14583 | ||||
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
RNA (5'-R(P*GP*GP*CP*AP*AP*A)-3') | E, F [auth G] | 6 | Rice dwarf virus | ||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
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a = 80.754 | α = 104.74 |
b = 80.657 | β = 104 |
c = 145.734 | γ = 95.29 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
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JSPS | Japan | JP25251009 |