2.55 A resolution structure of IpaD from Shigella flexneri in complex with single-domain antibody JMK-H2
Barta, M.L., Lovell, S., Battaile, K.P., Picking, W.D., Picking, W.L.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
single-domain antibody JMK-H2 | A [auth B] | 155 | Vicugna pacos | Mutation(s): 0  | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Invasin IpaD | B [auth A] | 289 | Shigella flexneri | Mutation(s): 1  Gene Names: ipaD, CP0126 | |
UniProt | |||||
Find proteins for P18013 (Shigella flexneri) Explore P18013  Go to UniProtKB:  P18013 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P18013 | ||||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 56.641 | α = 90 |
b = 107.913 | β = 90 |
c = 174.319 | γ = 90 |
Software Name | Purpose |
---|---|
Aimless | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
PHASER | phasing |