5TI1

Crystal Structure of Fumarylacetoacetate hydrolase from Burkholderia xenovorans LB400


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.199 
  • R-Value Work: 0.154 
  • R-Value Observed: 0.155 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Crystal Structure of Fumarylacetoacetate hydrolase from Burkholderia xenovorans LB400

Seattle Structural Genomics Center for Infectious DiseaseDelker, S.L.Abendroth, J.Lorimer, D.Edwards, T.E.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Fumarylacetoacetate hydrolase
A, B, C, D, E
A, B, C, D, E, F, G, H
444Paraburkholderia xenovorans LB400Mutation(s): 0 
Gene Names: Bxe_A3899
EC: 3.7.1.2
UniProt
Find proteins for Q144Z1 (Paraburkholderia xenovorans (strain LB400))
Explore Q144Z1 
Go to UniProtKB:  Q144Z1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ144Z1
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 4 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
PO4
Query on PO4

Download Ideal Coordinates CCD File 
Y [auth F]PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
NO3
Query on NO3

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CA [auth G]
FA [auth H]
O [auth C]
R [auth D]
S [auth D]
CA [auth G],
FA [auth H],
O [auth C],
R [auth D],
S [auth D],
V [auth E],
Z [auth F]
NITRATE ION
N O3
NHNBFGGVMKEFGY-UHFFFAOYSA-N
MG
Query on MG

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AA [auth G]
DA [auth H]
I [auth A]
K [auth B]
M [auth C]
AA [auth G],
DA [auth H],
I [auth A],
K [auth B],
M [auth C],
P [auth D],
T [auth E],
W [auth F]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
NA
Query on NA

Download Ideal Coordinates CCD File 
BA [auth G]
EA [auth H]
J [auth A]
L [auth B]
N [auth C]
BA [auth G],
EA [auth H],
J [auth A],
L [auth B],
N [auth C],
Q [auth D],
U [auth E],
X [auth F]
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.199 
  • R-Value Work: 0.154 
  • R-Value Observed: 0.155 
  • Space Group: P 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 65.9α = 101.63
b = 83.1β = 91.17
c = 186.29γ = 113.81
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data collection
XDSdata scaling
XDSdata reduction
MoRDaphasing

Structure Validation

View Full Validation Report



Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2017-02-08
    Type: Initial release
  • Version 1.1: 2017-08-02
    Changes: Other, Structure summary
  • Version 1.2: 2023-10-04
    Changes: Data collection, Database references, Derived calculations, Refinement description