Conformational Sampling Differences across the Arrhenius Plot Biphasic Break Point at Ambient Temperature in the Enzyme Thermolysin
Dong, M., Bahnson, B.J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Thermolysin | 316 | Bacillus thermoproteolyticus | Mutation(s): 0  Gene Names: npr EC: 3.4.24.27 | ![]() | |
UniProt | |||||
Find proteins for P00800 (Bacillus thermoproteolyticus) Explore P00800  Go to UniProtKB:  P00800 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P00800 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
LYS Query on LYS | H [auth A] | LYSINE C6 H15 N2 O2 KDXKERNSBIXSRK-YFKPBYRVSA-O | |||
VAL Query on VAL | G [auth A] | VALINE C5 H11 N O2 KZSNJWFQEVHDMF-BYPYZUCNSA-N | |||
ZN Query on ZN | F [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
CA Query on CA | B [auth A], C [auth A], D [auth A], E [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 93.715 | α = 90 |
b = 93.715 | β = 90 |
c = 131.235 | γ = 120 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
Coot | model building |
HKL-2000 | data scaling |
REFMAC | phasing |
HKL-2000 | data reduction |