Crystal structure of human Cathepsin-S with bound ligand
Bembenek, S.D., Ameriks, M.K., Mirzadegan, T., Yang, H., Shao, C., Burley, S.K.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Cathepsin S | 223 | Homo sapiens | Mutation(s): 1  Gene Names: CTSS EC: 3.4.22.27 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P25774 (Homo sapiens) Explore P25774  Go to UniProtKB:  P25774 | |||||
PHAROS:  P25774 GTEx:  ENSG00000163131  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P25774 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
BCJ Query on BCJ | C [auth A], D [auth B] | (4~{S})-1-[1-[(2~{S})-3-[3-[3-[2-(4-methylpiperidin-1-yl)ethylsulfanyl]-4-(trifluoromethyl)phenyl]-5-methylsulfonyl-6,7-dihydro-4~{H}-pyrazolo[4,3-c]pyridin-1-yl]-2-oxidanyl-propyl]piperidin-4-yl]-4-oxidanyl-pyrrolidin-2-one C34 H49 F3 N6 O5 S2 CKJQVJQFVFWPOY-SVBPBHIXSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 37.078 | α = 102.44 |
b = 58.012 | β = 107.58 |
c = 58.931 | γ = 106.19 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
PDB_EXTRACT | data extraction |
MOSFLM | data reduction |
SCALA | data scaling |