5N14 | pdb_00005n14

NMR structure calculation of a composite Cys2His2 type zinc finger protein containing a non-peptide (or oligourea) helical domain

PDB DOI: https://doi.org/10.2210/pdb5N14/pdb
BMRB: 34094

Classification: TRANSCRIPTION/DNA
Organism(s): Homo sapiens
Mutation(s): No

Deposited: 2017-02-05 Released: 2017-04-12
Deposition Author(s): Venkateshaiah M, V.K., Salgado, G.
Funding Organization(s): French National Research Agency

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 10
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 5N14

This is version 3.1 of the entry. See complete history.

Literature

NMR structure calculation of a composite Cys2His2 type zinc finger protein containing a non-peptide (or oligourea) helical domain.

Venkateshaiah Machohally, V.K., Salgado, G., Lombardo, C., Mergny, J.L., Guichard, G.

To be published.

Macromolecule Content

Total Structure Weight: 3.32 kDa
Atom Count: 427
Modeled Residue Count: 25
Deposited Residue Count: 25
Unique protein chains: 1

Macromolecules

Find similar proteins by: Sequence | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Protein (chimeric oligourea-peptide zinc finger)	A	25	Homo sapiens	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for P18146 (Homo sapiens) Explore P18146 Go to UniProtKB: P18146
PHAROS: P18146 GTEx: ENSG00000120738
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P18146
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ZN Query on ZN Download:Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A] mmCIF format, chain B [auth A]	B [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain B [auth A]

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 10
Selection Criteria: structures with the lowest energy

Structure Validation

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View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2017-04-12

Deposition Author(s):

Venkateshaiah M, V.K.

Funding Organization	Location	Grant Number
French National Research Agency	France	Foldart

Revision History (Full details and data files)

Version 1.0: 2017-04-12
Type: Initial release
Version 2.0: 2019-05-22
Changes: Advisory, Atomic model, Author supporting evidence, Data collection, Derived calculations
Version 3.0: 2023-11-15
Changes: Atomic model, Data collection, Database references, Derived calculations
Version 3.1: 2024-10-16
Changes: Database references, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.