The case of 1lkr held at the PDB and its variable amino acid occupancies; re refinement of 4ow9 to correct this
Helliwell, J.R., Tanley, S.W.M.(2016) Zenodo 
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
(2016) Zenodo 
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Lysozyme C | 129 | Gallus gallus | Mutation(s): 0  EC: 3.2.1.17 | ||
UniProt | |||||
Find proteins for P00698 (Gallus gallus) Explore P00698  Go to UniProtKB:  P00698 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P00698 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PT Query on PT | C [auth A], D [auth A], Z [auth B] | PLATINUM (II) ION Pt HRGDZIGMBDGFTC-UHFFFAOYSA-N | |||
IOD Query on IOD | AA [auth B] BA [auth B] CA [auth B] DA [auth B] E [auth A] | IODIDE ION I XMBWDFGMSWQBCA-UHFFFAOYSA-M | |||
DMS Query on DMS | HA [auth B] IA [auth B] JA [auth B] P [auth A] Q [auth A] | DIMETHYL SULFOXIDE C2 H6 O S IAZDPXIOMUYVGZ-UHFFFAOYSA-N | |||
CL Query on CL | KA [auth B], S [auth A], T [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M | |||
NA Query on NA | LA [auth B] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 27.251 | α = 90 |
b = 62.537 | β = 90.92 |
c = 58.981 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
PHASER | phasing |
PROTEUM PLUS | data reduction |
PROTEUM PLUS | data scaling |
Funding Organization | Location | Grant Number |
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Engineering and Physical Sciences Research Council | United Kingdom | -- |