5LR1 | pdb_00005lr1

CRYSTAL STRUCTURE OF HSP90 IN COMPLEX WITH A003498614A.

• PDB DOI: https://doi.org/10.2210/pdb5LR1/pdb

• Classification: CHAPERONE PROTEIN
• Organism(s): Homo sapiens
• Expression System: Escherichia coli BL21
• Mutation(s): No 


• Deposited: 2016-08-18 Released: 2017-08-23 
• Deposition Author(s): Vallee, F., Dupuy, A.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.44 Å
• R-Value Free: 
  0.220 (Depositor), 0.207 (DCC) 
• R-Value Work: 
  0.199 (Depositor), 0.193 (DCC) 
• R-Value Observed: 
  0.200 (Depositor) 

Starting Model: experimental

Literature

CRYSTAL STRUCTURE OF HSP90 IN COMPLEX WITH A003498614A.

Vallee, F., Dupuy, A.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 23.63 kDa 
• Atom Count: 1,954 
• Modeled Residue Count: 208 
• Deposited Residue Count: 208 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Heat shock protein HSP 90-alpha	A	208	Homo sapiens	Mutation(s): 0  Gene Names: HSP90AA1, HSP90A, HSPC1, HSPCA EC: 3.6.4.10
UniProt & NIH Common Fund Data Resources
Find proteins for P07900 (Homo sapiens) Explore P07900  Go to UniProtKB:  P07900
PHAROS:  P07900 GTEx:  ENSG00000080824

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
72Y	B [auth A]	4-chloranyl-7-[(4-chloranyl-3,5-dimethyl-pyridin-2-yl)methyl]pyrrolo[2,3-d]pyrimidin-2-amine C14 H13 Cl2 N5 UTYKALJIQPGPEY-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.44 Å
• R-Value Free:  0.220 (Depositor), 0.207 (DCC) 
• R-Value Work:  0.199 (Depositor), 0.193 (DCC) 
• R-Value Observed: 0.200 (Depositor) 

Space Group: I 2 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 66.54	α = 90
b = 90.68	β = 90
c = 98.23	γ = 90

Software Package:

Software Name	Purpose
BUSTER	refinement
XDS	data reduction
Aimless	data scaling
PHASER	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2017-08-23 
Deposition Author(s): Vallee, F., Dupuy, A.

Revision History  

• Version 1.0: 2017-08-23
  Type: Initial release
  
• Version 1.1: 2019-06-12
  Changes: Data collection, Database references, Structure summary
• Version 1.2: 2024-01-10
  Changes: Data collection, Database references, Refinement description