5I7G | pdb_00005i7g

Metal free Glucose Isomerase collected at room temperature using the HC1b humidity controller

PDB DOI: https://doi.org/10.2210/pdb5I7G/pdb

Classification: ISOMERASE
Organism(s): Streptomyces pseudogriseolus
Mutation(s): No

Deposited: 2016-02-17 Released: 2016-02-24
Deposition Author(s): Sandy, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.21 Å
R-Value Free:
0.162 (Depositor), 0.165 (DCC)
R-Value Work:
0.137 (Depositor), 0.141 (DCC)
R-Value Observed:
0.138 (Depositor)

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This is version 2.0 of the entry. See complete history.

Literature

Metal free Glucose Isomerase collected at room temperature using the HC1b humidity controller

Sandy, J.

To be published.

Macromolecule Content

Total Structure Weight: 43.28 kDa
Atom Count: 3,376
Modeled Residue Count: 386
Deposited Residue Count: 388
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Xylose isomerase	A	388	Streptomyces pseudogriseolus	Mutation(s): 0 EC: 5.3.1.5
UniProt
Find proteins for P24300 (Streptomyces pseudogriseolus) Explore P24300 Go to UniProtKB: P24300
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P24300
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.21 Å
R-Value Free: 0.162 (Depositor), 0.165 (DCC)
R-Value Work: 0.137 (Depositor), 0.141 (DCC)
R-Value Observed: 0.138 (Depositor)

Space Group: I 2 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 93.815	α = 90
b = 99.698	β = 90
c = 102.755	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
DIALS	data reduction
DIALS	data scaling
PH	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2016-02-24

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2016-02-24
Type: Initial release
Version 2.0: 2024-05-08
Changes: Atomic model, Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.