5HXG | pdb_00005hxg

STM1697-FlhD complex

PDB DOI: https://doi.org/10.2210/pdb5HXG/pdb

Classification: TRANSCRIPTION
Organism(s): Salmonella enterica subsp. enterica serovar Infantis str. SARB27
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2016-01-30 Released: 2017-02-15
Deposition Author(s): Li, B., Yuan, Z., Qin, L., Gu, L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free:
0.206 (Depositor), 0.209 (DCC)
R-Value Work:
0.178 (Depositor), 0.181 (DCC)
R-Value Observed:
0.179 (Depositor)

wwPDB Validation 3D Report Full Report

Validation slider image for 5HXG

This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of STM1697-FlhD complex

Li, B., Yue, Y., Yuan, Z., Zhang, F., Liu, Y., Li, P., Song, N., Li, Z., Gu, L., Qin, L.

To be published.

Macromolecule Content

Total Structure Weight: 79.61 kDa
Atom Count: 4,682
Modeled Residue Count: 552
Deposited Residue Count: 702
Unique protein chains: 2

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein STM1697	A, C	235	Salmonella enterica subsp. enterica serovar Infantis str. SARB27	Mutation(s): 0 Gene Names: SEENIN0B_01477
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Flagellar transcriptional regulator FlhD	B, D	116	Salmonella enterica subsp. enterica serovar Infantis str. SARB27	Mutation(s): 0 Gene Names: flhD, SEENIN0B_01241
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free: 0.206 (Depositor), 0.209 (DCC)
R-Value Work: 0.178 (Depositor), 0.181 (DCC)
R-Value Observed: 0.179 (Depositor)

Space Group: P 3₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 61.006	α = 90
b = 61.006	β = 90
c = 166.891	γ = 120

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
HKL-2000	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2017-02-15

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2017-02-15
Type: Initial release
Version 1.1: 2024-03-20
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.