Structural Definition Of Duck MHC Class I For 2.06 Angstrom Explains its Resistance to Influenza A virus
Wu, Y., Xia, C.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
MHC class I antigen | 273 | Anas platyrhynchos | Mutation(s): 1 Gene Names: Du5MHC I | ||
UniProt | |||||
Find proteins for Q6I7L2 (Anas platyrhynchos) Explore Q6I7L2 Go to UniProtKB: Q6I7L2 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q6I7L2 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Beta-2-microglobulin | 104 | Anas platyrhynchos | Mutation(s): 0 Gene Names: b2m | ||
UniProt | |||||
Find proteins for Q14U75 (Anas platyrhynchos) Explore Q14U75 Go to UniProtKB: Q14U75 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q14U75 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
ARG-LEU-ILE-GLN-ASN-SER-ILE-THR-ILE | 9 | unidentified influenza virus | Mutation(s): 0 | ||
UniProt | |||||
Find proteins for Q9Q0U8 (Influenza A virus (strain A/Goose/Guangdong/1/1996 H5N1 genotype Gs/Gd)) Explore Q9Q0U8 Go to UniProtKB: Q9Q0U8 | |||||
Entity Groups | |||||
UniProt Group | Q9Q0U8 | ||||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 46.487 | α = 90 |
b = 63.538 | β = 106.1 |
c = 79.954 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHASER | phasing |
REFMAC | refinement |
Funding Organization | Location | Grant Number |
---|---|---|
National Key Basic Research Program of China | China | 2013CB835302 |
National Natural Science Foundation of China | China | No. 31572493 |