5FV8 | pdb_00005fv8

Structure of cJun-FosW coiled coil complex.

PDB DOI: https://doi.org/10.2210/pdb5FV8/pdb

Classification: STRUCTURAL PROTEIN
Organism(s): Homo sapiens
Mutation(s): No

Deposited: 2016-02-03 Released: 2017-06-07
Deposition Author(s): Zaccai, N.R., Mason, J.M., Brady, R.L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.99 Å
R-Value Free:
0.246 (Depositor), 0.239 (DCC)
R-Value Work:
0.209 (Depositor), 0.207 (DCC)
R-Value Observed:
0.210 (Depositor)

Starting Model: experimental
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Ligand Structure Quality Assessment

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Literature

Helix-Constrained Fos-Based Peptides Inhibit Oncogenic Activator Protein-1 and Cancer Cell Proliferation

Baxter, D., Perry, S.R., Hill, T.A., Kok, W.M., Zaccai, N.R., Brady, R.L., Fairlie, D.P., Mason, J.M.

To be published.

Macromolecule Content

Total Structure Weight: 18.3 kDa
Atom Count: 1,291
Modeled Residue Count: 144
Deposited Residue Count: 152
Unique protein chains: 2

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
FOSW	A, B	38	Homo sapiens	Mutation(s): 0

Find similar proteins by:

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
CJUN	C [auth D], D [auth E]	38	Homo sapiens	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for P05412 (Homo sapiens) Explore P05412 Go to UniProtKB: P05412
PHAROS: P05412 GTEx: ENSG00000177606
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P05412
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
JEF Query on JEF Download:Ideal Coordinates CCD File SDF format, chain G [auth E] SDF format, chain F [auth E] MOL2 format, chain G [auth E] MOL2 format, chain F [auth E] mmCIF format, chain G [auth E] mmCIF format, chain F [auth E]	F [auth E], G [auth E]	O-(O-(2-AMINOPROPYL)-O'-(2-METHOXYETHYL)POLYPROPYLENE GLYCOL 500) C₃₀ H₆₃ N O₁₀ ICCXIDTYQFYPNV-RUMGZKRTSA-N		Interactions Focus chain F [auth E] Focus chain G [auth E] Interactions & Density Focus chain F [auth E] Focus chain G [auth E]
GOL Query on GOL Download:Ideal Coordinates CCD File SDF format, chain E [auth B] MOL2 format, chain E [auth B] mmCIF format, chain E [auth B]	E [auth B]	GLYCEROL C₃ H₈ O₃ PEDCQBHIVMGVHV-UHFFFAOYSA-N		Interactions Focus chain E [auth B] Interactions & Density Focus chain E [auth B]

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.99 Å
R-Value Free: 0.246 (Depositor), 0.239 (DCC)
R-Value Work: 0.209 (Depositor), 0.207 (DCC)
R-Value Observed: 0.210 (Depositor)

Space Group: I 4₁ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 63.82	α = 90
b = 63.82	β = 90
c = 190.63	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
Aimless	data scaling
PHASER	phasing

Structure Validation

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Ligand Structure Quality Assessment

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Entry History

Deposition Data

Released Date: 2017-06-07

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2017-06-07
Type: Initial release
Version 1.1: 2024-01-10
Changes: Data collection, Database references, Derived calculations, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.