5CYT

REFINEMENT OF MYOGLOBIN AND CYTOCHROME C

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Work: 0.159 

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Ligand Structure Quality Assessment 


This is version 2.1 of the entry. See complete history. 


Literature

Refinement of Myoglobin and Cytochrome C

Takano, T.

(1984) Methods And Applications In Crystallographic Computing : 262


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
CYTOCHROME CA [auth R]104Thunnus alalungaMutation(s): 0 
UniProt
Find proteins for P81459 (Thunnus alalunga)
Explore P81459 
Go to UniProtKB:  P81459
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP81459
Sequence Annotations
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
HEC
Query on HEC
Download Ideal Coordinates CCD File 
B [auth R]HEME C
C34 H34 Fe N4 O4
HXQIYSLZKNYNMH-LJNAALQVSA-N
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Work: 0.159 
  • Space Group: P 21 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 37.33α = 90
b = 87.1β = 90
c = 34.44γ = 90
Software Package:
Software NamePurpose
EREFrefinement

Structure Validation

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Ligand Structure Quality Assessment 


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Entry History 

Deposition Data

  • Released Date: 1989-07-12 
    • Deposition Author(s): Takano, T.
  • This entry supersedes: 4CYT

Revision History  (Full details and data files)

  • Version 1.0: 1989-07-12
    Type: Initial release
  • Version 1.1: 2008-03-25
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2017-11-29
    Changes: Derived calculations, Other
  • Version 2.0: 2021-03-03
    Changes: Advisory, Atomic model, Data collection, Database references, Derived calculations, Non-polymer description, Structure summary
  • Version 2.1: 2024-10-09
    Changes: Data collection, Database references, Structure summary