Interrogating TCR Signal Strength and Cross-Reactivity by Yeast Display of pMHC
Birnbaum, M.E., Adams, J.J., Garcia, K.C.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
2C m33 alpha VmCh chimera | A, D [auth C] | 219 | Mus musculus, Homo sapiens This entity is chimeric | Mutation(s): 0  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01738 (Mus musculus) Explore P01738  Go to UniProtKB:  P01738 | |||||
Find proteins for P01848 (Homo sapiens) Explore P01848  Go to UniProtKB:  P01848 | |||||
PHAROS:  P01848 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Groups | P01738P01848 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
2C m33 beta VmCh chimera | B, E [auth D] | 254 | Mus musculus, Homo sapiens This entity is chimeric | Mutation(s): 0  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P04213 (Mus musculus) Explore P04213  Go to UniProtKB:  P04213 | |||||
Find proteins for A0A5B9 (Homo sapiens) Explore A0A5B9  Go to UniProtKB:  A0A5B9 | |||||
PHAROS:  A0A5B9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Groups | P04213A0A5B9 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
H-2 class I histocompatibility antigen, L-D alpha chain | C [auth E], F [auth G] | 204 | Mus musculus | Mutation(s): 6  Gene Names: H2-L | |
UniProt | |||||
Find proteins for P01897 (Mus musculus) Explore P01897  Go to UniProtKB:  P01897 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P01897 | ||||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 49.76 | α = 112.29 |
b = 92.8 | β = 103.57 |
c = 94.95 | γ = 102.37 |
Software Name | Purpose |
---|---|
Blu-Ice | data collection |
PHASER | phasing |
PHENIX | refinement |
MOSFLM | data reduction |
SCALA | data scaling |