Crystal structure of a LAGLIDADG endonuclease from the Sordaria Macrospore.
Chik, J., Shen, B., Stoddard, B.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
LAGLIDADG homing endonuclease I-SmaMI | 302 | Sordaria macrospora k-hell | Mutation(s): 0  Gene Names: Cytochrome c oxidase subunit 1, mitochondrial Introne encoded, SMAC_12671 | ||
UniProt | |||||
Find proteins for F7WD42 (Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell)) Explore F7WD42  Go to UniProtKB:  F7WD42 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | F7WD42 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*CP*GP*TP*AP*CP*AP*CP*CP*TP*GP*AP*TP*AP*A)-3') | 14 | N/A | |||
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Entity ID: 3 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(P*TP*GP*GP*AP*GP*GP*AP*TP*AP*CP*C)-3') | 11 | N/A | |||
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Entity ID: 4 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*GP*GP*TP*AP*TP*CP*CP*TP*CP*CP*AP*TP*TP*AP*T)-3') | 15 | N/A | |||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MG Query on MG | F [auth A], G [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 61.284 | α = 90 |
b = 67.429 | β = 90 |
c = 98.09 | γ = 90 |
Software Name | Purpose |
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ADSC | data collection |
PHASER | phasing |
REFMAC | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |