4LOX | pdb_00004lox

Crystal structure of the I-SmaMI LAGLIDADG homing endonuclease bound to cleaved DNA

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASNFe4loxA1 A: a/b three-layered sandwichesX: Mitochondrial mTERF-likeH: Transcription activator-like effector (TALE)T: Transcription activator-like effector (TALE)F: SNFECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.10.28.10 Alpha Beta Roll Endonuclease I-creI Homing endonucleasesCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00961LAGLIDADG endonuclease (LAGLIDADG_1)LAGLIDADG endonucleaseDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DNA (5'-D(P*CP*AP*GP*GP*TP*GP*TP*AP*CP*G)-3')---
DNA (5'-D(*GP*GP*TP*AP*TP*CP*CP*TP*CP*CP*AP*TP*TP*AP*T)-3')---
DNA (5'-D(P*TP*GP*GP*AP*GP*GP*AP*TP*AP*CP*C)-3')---
DNA (5'-D(*CP*GP*TP*AP*CP*AP*CP*CP*TP*GP*AP*TP*AP*A)-3')---
LAGLIDADG homing endonuclease I-SmaMI -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR051289LAGLIDADG Homing EndonucleaseFamily
IPR004860Homing endonuclease, LAGLIDADG domainDomain
IPR027434Homing endonucleaseHomologous Superfamily