4JG2 | pdb_00004jg2

Structure of phage-related protein from Bacillus cereus ATCC 10987

PDB DOI: https://doi.org/10.2210/pdb4JG2/pdb

Classification: UNKNOWN FUNCTION
Organism(s): Bacillus cereus ATCC 10987
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2013-02-28 Released: 2013-03-27
Deposition Author(s): Filippova, E.V., Wawrzak, Z., Minasov, G., Shuvalova, L., Kiryukhina, O., Babnigg, G., Rubin, E., Sacchettini, J., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.30 Å
R-Value Free:
0.163 (Depositor), 0.163 (DCC)
R-Value Work:
0.124 (Depositor), 0.125 (DCC)
R-Value Observed:
0.126 (Depositor)

wwPDB Validation 3D Report Full Report

Validation slider image for 4JG2

This is version 1.3 of the entry. See complete history.

Literature

Structure of phage-related protein from Bacillus cereus ATCC 10987

Filippova, E.V., Wawrzak, Z., Minasov, G., Shuvalova, L., Kiryukhina, O., Babnigg, G., Rubin, E., Sacchettini, J., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)

To be published.

Macromolecule Content

Total Structure Weight: 22.96 kDa
Atom Count: 1,851
Modeled Residue Count: 185
Deposited Residue Count: 208
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Phage-related protein	A	208	Bacillus cereus ATCC 10987	Mutation(s): 0 Gene Names: BCE_0376
UniProt
Find proteins for Q73EI2 (Bacillus cereus (strain ATCC 10987 / NRS 248)) Explore Q73EI2 Go to UniProtKB: Q73EI2
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q73EI2
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.30 Å
R-Value Free: 0.163 (Depositor), 0.163 (DCC)
R-Value Work: 0.124 (Depositor), 0.125 (DCC)
R-Value Observed: 0.126 (Depositor)

Diffraction Data:

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 44.532	α = 90
b = 51.476	β = 90
c = 73.345	γ = 90

Software Package:

Software Name	Purpose
Blu-Ice	data collection
PHENIX	model building
REFMAC	refinement
XDS	data reduction
XDS	data scaling
PHENIX	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2013-03-27

Deposition Author(s):

Filippova, E.V.

Sacchettini, J.

Midwest Center for Structural Genomics (MCSG)

Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)

Revision History (Full details and data files)

Version 1.0: 2013-03-27
Type: Initial release
Version 1.1: 2017-11-15
Changes: Refinement description
Version 1.2: 2018-01-24
Changes: Database references
Version 1.3: 2024-02-28
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.