Crystal structure of LAGLIDADG homing endonuclease I-GzeII in complex with DNA target
Stoddard, B.L., Lambert, A.R., Kulshina, N.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
LAGLIDADG endonuclease | E [auth A], F [auth B] | 299 | Fusarium graminearum PH-1 | Mutation(s): 7  Gene Names: nad2 | |
UniProt | |||||
Find proteins for A5J036 (Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1)) Explore A5J036  Go to UniProtKB:  A5J036 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A5J036 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 1 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (27-MER) | A [auth C], C [auth E] | 27 | synthetic construct | ||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (27-MER) | B [auth D], D [auth F] | 27 | synthetic construct | ||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CA Query on CA | G [auth A], H [auth A], I [auth B], J [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 125.833 | α = 90 |
b = 61.186 | β = 116.3 |
c = 128.871 | γ = 90 |
Software Name | Purpose |
---|---|
HKL-2000 | data reduction |
SCALEPACK | data scaling |
PHASER | phasing |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
Coot | model building |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | R01 GM49857 |
National Institutes of Health/National Cancer Institute (NIH/NCI) | United States | RL1 CA133833 |