4WNY

Crystal structure of a protein from the universal stress protein family from Burkholderia pseudomallei

• PDB DOI: https://doi.org/10.2210/pdb4WNY/pdb

• Classification: SIGNALING PROTEIN
• Organism(s): Burkholderia pseudomallei 1710b
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2014-10-14 Released: 2014-11-05 
• Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.25 Å
• R-Value Free: 0.227 
• R-Value Work: 0.224 
• R-Value Observed: 0.224 

Starting Model: experimental

Literature

Crystal structure of a protein from the universal stress protein family from Burkholderia pseudomallei

Seattle Structural Genomics Center for Infectious Disease (SSGCID), Abendroth, J., Dranow, D.M., Lorimer, D.D., Edwards, T.E.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 17.92 kDa 
• Atom Count: 975 
• Modelled Residue Count: 132 
• Deposited Residue Count: 168 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Universal stress protein	A	168	Burkholderia pseudomallei 1710b	Mutation(s): 0  Gene Names: BURPS1710b_A2430
UniProt
Find proteins for Q3JFS3 (Burkholderia pseudomallei (strain 1710b)) Explore Q3JFS3  Go to UniProtKB:  Q3JFS3

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.25 Å
• R-Value Free: 0.227 
• R-Value Work: 0.224 
• R-Value Observed: 0.224 
• Space Group: P 3₁ 2 1
• Diffraction Data: https://doi.org/10.18430/M34WNY

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 79.26	α = 90
b = 79.26	β = 90
c = 39.64	γ = 120

Software Package:

Software Name	Purpose
XDS	data reduction
MOLREP	phasing
ARP	model building
PHENIX	refinement
PDB_EXTRACT	data extraction

Structure Validation

Entry History 

Deposition Data

• Released Date: 2014-11-05 
Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Revision History  

• Version 1.0: 2014-11-05
  Type: Initial release
  
• Version 1.1: 2023-09-27
  Changes: Data collection, Database references, Derived calculations, Other, Refinement description, Source and taxonomy, Structure summary