Direct detection of active-site geometries in soybean lipoxygenase-1 by ENDOR
Carr, C.A.M., Horitani, M., Offenbacher, A.R., Knitz, M.W., Klinman, J.P., Hoffman, B.M.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Seed linoleate 13S-lipoxygenase-1 | 858 | Glycine max | Mutation(s): 1  Gene Names: LOX1.1, LOX1 EC: 1.13.11.12 | ||
UniProt | |||||
Find proteins for P08170 (Glycine max) Explore P08170  Go to UniProtKB:  P08170 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P08170 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
EDO Query on EDO | C [auth A] D [auth A] E [auth A] F [auth A] G [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
ACT Query on ACT | K [auth A] L [auth A] M [auth A] N [auth A] O [auth A] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M | |||
MN Query on MN | B [auth A] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 48.123 | α = 90 |
b = 91.497 | β = 93.88 |
c = 90.897 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | GM025765 |
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | T32 GM008295 |
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | P50GM082250 |
National Science Foundation (NSF, United States) | United States | CHE-0840505 |