4UW1

X-ray crystal structure of human TNKS in complex with a small molecule inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.37 Å
  • R-Value Free: 
    0.322 (Depositor), 0.300 (DCC) 
  • R-Value Work: 
    0.266 (Depositor), 0.250 (DCC) 
  • R-Value Observed: 
    0.269 (Depositor) 

Starting Model: experimental
View more details

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 

Created with Raphaël 2.3.0Worse 01 BetterLigand structure goodness of fit to experimental dataBest fitted 92RClick on this verticalbar to view details

This is version 1.2 of the entry. See complete history


Literature

Design and Discovery of 3-Aryl-5-Substituted-Isoquinolin-1-Ones as Potent and Selective Tankyrase Inhibitors

Elliot, R.J.Jarvis, A.Rajasekaran, M.B.Menon, M.Bowers, L.Boffey, R.Bayford, M.Firth-Clark, S.Beevers, R.Aquil, R.Kirton, S.B.Niculescu-Duvaz, D.Fish, L.Lopes, F.Mcleary, R.Trindade, I.Vendrell, E.Munkonge, F.Porter, R.Perrior, T.Springer, C.Oliver, A.W.Pearl, L.H.Ashworth, A.Lord, C.J.

(2015) Med Chem Res 6: 1687


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
TANKYRASE-1
A, B, C, D, E
258Homo sapiensMutation(s): 1 
EC: 2.4.2.30 (PDB Primary Data), 2.4.2 (UniProt)
UniProt & NIH Common Fund Data Resources
Find proteins for O95271 (Homo sapiens)
Explore O95271 
Go to UniProtKB:  O95271
PHAROS:  O95271
GTEx:  ENSG00000173273 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO95271
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 4 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
92R
Query on 92R

Download Ideal Coordinates CCD File 
BA [auth G]
DA [auth H]
L [auth A]
N [auth B]
R [auth C]
3-{4-[(dimethylamino)methyl]phenyl}-5-methoxyisoquinolin-1(2H)-one
C19 H20 N2 O2
GXNFWDRMXAHNFL-UHFFFAOYSA-N
GOL
Query on GOL

Download Ideal Coordinates CCD File 
J [auth A],
P [auth C],
T [auth D]
GLYCEROL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
ZN
Query on ZN

Download Ideal Coordinates CCD File 
CA [auth H]
I [auth A]
M [auth B]
O [auth C]
S [auth D]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
EDO
Query on EDO

Download Ideal Coordinates CCD File 
AA [auth G],
K [auth A],
Q [auth C]
1,2-ETHANEDIOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.37 Å
  • R-Value Free:  0.322 (Depositor), 0.300 (DCC) 
  • R-Value Work:  0.266 (Depositor), 0.250 (DCC) 
  • R-Value Observed: 0.269 (Depositor) 
Space Group: P 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 80.589α = 71.38
b = 82.312β = 67.31
c = 86.727γ = 89.51
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 

Created with Raphaël 2.3.0Worse 01 BetterLigand structure goodness of fit to experimental dataBest fitted 92RClick on this verticalbar to view details

Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2015-07-08
    Type: Initial release
  • Version 1.1: 2016-01-13
    Changes: Database references
  • Version 1.2: 2024-01-10
    Changes: Data collection, Database references, Derived calculations, Other, Refinement description