4OVJ | pdb_00004ovj

Extracellular solute-binding protein family 1 from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446

• PDB DOI: https://doi.org/10.2210/pdb4OVJ/pdb

• Classification: TRANSPORT PROTEIN
• Organism(s): Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2013-10-14 Released: 2013-11-06 
• Deposition Author(s): Chang, C., Clancy, S., Li, H., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.65 Å
• R-Value Free: 
  0.163 (Depositor), 0.163 (DCC) 
• R-Value Work: 
  0.119 (Depositor), 0.118 (DCC) 
• R-Value Observed: 
  0.121 (Depositor) 

Literature

extracellular solute-binding protein family 1 from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446

Chang, C., Clancy, S., Li, H., Joachimiak, A.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 45.93 kDa 
• Atom Count: 3,685 
• Modeled Residue Count: 396 
• Deposited Residue Count: 418 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Extracellular solute-binding protein family 1	A	418	Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446	Mutation(s): 0  Gene Names: Aaci_2460
UniProt
Find proteins for C8WSI1 (Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / BCRC 14685 / JCM 5260 / KCTC 1825 / NBRC 15652 / NCIMB 11725 / NRRL B-14509 / 104-IA)) Explore C8WSI1  Go to UniProtKB:  C8WSI1

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
SO4	B [auth A]	SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.65 Å
• R-Value Free:  0.163 (Depositor), 0.163 (DCC) 
• R-Value Work:  0.119 (Depositor), 0.118 (DCC) 
• R-Value Observed: 0.121 (Depositor) 

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 59.716	α = 90
b = 38.819	β = 92.15
c = 82.456	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
HKL-3000	phasing
HKL-3000	data reduction

Structure Validation

Entry History 

Deposition Data

• Released Date: 2013-11-06 
Deposition Author(s): Chang, C., Clancy, S., Li, H., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History  

• Version 1.0: 2013-11-06
  Type: Initial release
  
• Version 1.1: 2013-11-13
  Changes: Database references, Other
• Version 1.2: 2017-11-22
  Changes: Database references, Derived calculations, Experimental preparation, Other, Refinement description, Source and taxonomy, Structure summary
• Version 1.3: 2023-11-29
  Changes: Data collection, Database references
• Version 1.4: 2024-11-06
  Changes: Structure summary