Crystal Structure of His281Ala mutant of Benzoylformate Decarboxylase from Pseudomonas putida
Brodkin, H.R., Andrews, F.H., Milne, A.C., Petsko, G.A., Ringe, D., McLeish, M.J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Benzoylformate decarboxylase | 533 | Pseudomonas putida | Mutation(s): 1  Gene Names: mdlC EC: 4.1.1.7 | ||
UniProt | |||||
Find proteins for P20906 (Pseudomonas putida) Explore P20906  Go to UniProtKB:  P20906 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P20906 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
TPP Query on TPP | G [auth A], K [auth B], N [auth C], Q [auth D] | THIAMINE DIPHOSPHATE C12 H19 N4 O7 P2 S AYEKOFBPNLCAJY-UHFFFAOYSA-O | |||
GOL Query on GOL | H [auth A], O [auth C] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
CA Query on CA | F [auth A], J [auth B], L [auth B], M [auth C], P [auth D] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
MG Query on MG | E [auth A], I [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 70.505 | α = 90 |
b = 161.467 | β = 90 |
c = 175.854 | γ = 90 |
Software Name | Purpose |
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BlueIce-Epics | data collection |
PHENIX | model building |
PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHENIX | phasing |