4IYL

30S ribosomal protein S15 from Campylobacter jejuni

• PDB DOI: https://doi.org/10.2210/pdb4IYL/pdb
• Entry: 4IYL supersedes: 3ULW

• Classification: RIBOSOMAL PROTEIN
• Organism(s): Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2013-01-28 Released: 2013-02-06 
• Deposition Author(s): Osipiuk, J., Nocek, B., Gu, M., Kwon, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.36 Å
• R-Value Free: 0.281 
• R-Value Work: 0.246 
• R-Value Observed: 0.247 

Starting Model: experimental

Literature

30S ribosomal protein S15 from Campylobacter jejuni

Osipiuk, J., Nocek, B., Gu, M., Kwon, K., Anderson, W.F., Joachimiak, A.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly 2  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 2 generated by PISA (software)

Biological Assembly 3  

Global Symmetry: Dihedral - D2  (Explore in 3D)
Global Stoichiometry: Homo 4-mer - A4 

Biological assembly 3 generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 10.52 kDa 
• Atom Count: 682 
• Modelled Residue Count: 85 
• Deposited Residue Count: 93 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S15	A	93	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	Mutation(s): 0  Gene Names: Cj0884, rpsO
UniProt
Find proteins for Q0PA13 (Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)) Explore Q0PA13  Go to UniProtKB:  Q0PA13

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.36 Å
• R-Value Free: 0.281 
• R-Value Work: 0.246 
• R-Value Observed: 0.247 
• Space Group: I 2 2 2
• Diffraction Data: https://doi.org/10.18430/m34iyl

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 43.239	α = 90
b = 58.626	β = 90
c = 115.874	γ = 90

Software Package:

Software Name	Purpose
DENZO	data reduction
SCALEPACK	data scaling
REFMAC	refinement
PDB_EXTRACT	data extraction
SBC-Collect	data collection
HKL-3000	data reduction
HKL-3000	data scaling
MOLREP	phasing
HKL-3000	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2013-02-06 
Deposition Author(s): Osipiuk, J., Nocek, B., Gu, M., Kwon, K., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
• This entry supersedes: 3ULW

Revision History  

• Version 1.0: 2013-02-06
  Type: Initial release
  
• Version 1.1: 2017-11-15
  Changes: Refinement description
• Version 1.2: 2023-09-20
  Changes: Data collection, Database references, Refinement description