4GTN

Structure of anthranilate phosphoribosyl transferase from acinetobacter baylyi

• PDB DOI: https://doi.org/10.2210/pdb4GTN/pdb

• Classification: TRANSFERASE
• Organism(s): Acinetobacter baylyi ADP1
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2012-08-28 Released: 2013-08-28 
• Deposition Author(s): Ponniah, K., Nigon, L.V., Anderson, B.F., Norris, G.E., Patrick, W.M.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.03 Å
• R-Value Free: 0.230 
• R-Value Work: 0.171 
• R-Value Observed: 0.175 

Starting Model: experimental

Literature

Structure of anthranilate phosphoribosyl transferase from acinetobacter baylyi

Ponniah, K., Nigon, L.V., Anderson, B.F., Norris, G.E., Patrick, W.M.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 37.96 kDa 
• Atom Count: 2,778 
• Modelled Residue Count: 338 
• Deposited Residue Count: 353 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Anthranilate phosphoribosyltransferase	A	353	Acinetobacter baylyi ADP1	Mutation(s): 0  Gene Names: trpD EC: 2.4.2.18
UniProt
Find proteins for P00500 (Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)) Explore P00500  Go to UniProtKB:  P00500

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.03 Å
• R-Value Free: 0.230 
• R-Value Work: 0.171 
• R-Value Observed: 0.175 
• Space Group: C 2 2 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 59.58	α = 90
b = 70.1	β = 90
c = 171.41	γ = 90

Software Package:

Software Name	Purpose
CrystalClear	data collection
PHASER	phasing
PHENIX	refinement
xia2	data reduction
XDS	data reduction
SCALA	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2013-08-28 
Deposition Author(s): Ponniah, K., Nigon, L.V., Anderson, B.F., Norris, G.E., Patrick, W.M.

Revision History  

• Version 1.0: 2013-08-28
  Type: Initial release
  
• Version 1.1: 2017-11-15
  Changes: Refinement description
• Version 1.2: 2023-11-08
  Changes: Data collection, Database references, Refinement description