Structure of Recombinant Cytochrome ba3 Oxidase mutant V236N from Thermus thermophilus
Li, Y., Chen, Y., Stout, C.D.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cytochrome c oxidase subunit 1 | 569 | Thermus thermophilus HB8 | Mutation(s): 2 Gene Names: cbaA, TTHA1135 EC: 1.9.3.1 (PDB Primary Data), 7.1.1.9 (UniProt) Membrane Entity: Yes | ||
UniProt | |||||
Find proteins for Q5SJ79 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Explore Q5SJ79 Go to UniProtKB: Q5SJ79 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q5SJ79 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cytochrome c oxidase subunit 2 | 168 | Thermus thermophilus HB8 | Mutation(s): 0 Gene Names: cbaB, ctaC, TTHA1134 EC: 1.9.3.1 (PDB Primary Data), 7.1.1.9 (UniProt) Membrane Entity: Yes | ||
UniProt | |||||
Find proteins for Q5SJ80 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Explore Q5SJ80 Go to UniProtKB: Q5SJ80 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q5SJ80 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cytochrome c oxidase polypeptide 2A | 34 | Thermus thermophilus HB8 | Mutation(s): 0 Gene Names: cbaD, TTHA1133 EC: 1.9.3.1 (PDB Primary Data), 7.1.1.9 (UniProt) Membrane Entity: Yes | ||
UniProt | |||||
Find proteins for P82543 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Explore P82543 Go to UniProtKB: P82543 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P82543 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 6 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
HAS Query on HAS | F [auth A] | HEME-AS C54 H64 Fe N4 O6 PDYODZVCODUKFH-ZOMLSHGTSA-L | |||
HEM Query on HEM | E [auth A] | PROTOPORPHYRIN IX CONTAINING FE C34 H32 Fe N4 O4 KABFMIBPWCXCRK-RGGAHWMASA-L | |||
OLC Query on OLC | H [auth A] I [auth A] J [auth A] K [auth A] L [auth A] | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate C21 H40 O4 RZRNAYUHWVFMIP-GDCKJWNLSA-N | |||
CUB Query on CUB | D [auth A] | CU(I)-S-MO(IV)(=O)O-NBIC CLUSTER C5 H9 Cu Mo N O2 S KNSQHRMNQABPBN-UHFFFAOYSA-N | |||
CUA Query on CUA | S [auth B] | DINUCLEAR COPPER ION Cu2 ALKZAGKDWUSJED-UHFFFAOYSA-N | |||
PER Query on PER | G [auth A] | PEROXIDE ION O2 ANAIPYUSIMHBEL-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 144.44 | α = 90 |
b = 98.36 | β = 127.81 |
c = 94.84 | γ = 90 |
Software Name | Purpose |
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PHASER | phasing |
REFMAC | refinement |
MOSFLM | data reduction |
PROTEUM PLUS | data scaling |