4BL4 | pdb_00004bl4

Further structural insights into the binding of complement factor H by complement regulator acquiring surface protein 1, CspA (BbCRASP-1), of Borrelia burgdorferi.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 4.06 Å
  • R-Value Free: 
    0.271 (Depositor), 0.314 (DCC) 
  • R-Value Work: 
    0.262 (Depositor), 0.288 (DCC) 
  • R-Value Observed: 
    0.263 (Depositor) 

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

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This is version 1.2 of the entry. See complete history

Literature

Further Structural Insights Into the Binding of Complement Factor H by Complement Regulator-Acquiring Surface Protein 1 (CspA) of Borrelia Burgdorferi.

Caesar, J.J.E.Wallich, R.Kraiczy, P.Zipfel, P.F.Lea, S.M.

(2013) Acta Crystallogr Sect F Struct Biol Cryst Commun 69: 629

  • DOI: https://doi.org/10.1107/S1744309113012748
  • Primary Citation Related Structures: 
    4BL4

  • PubMed Abstract: 

    Borrelia burgdorferi has evolved many mechanisms of evading the different immune systems across its range of reservoir hosts, including the capture and presentation of host complement regulators factor H and factor H-like protein-1 (FHL-1). Acquisition is mediated by a family of complement regulator-acquiring surface proteins (CRASPs), of which the atomic structure of CspA (BbCRASP-1) is known and shows the formation of a homodimeric species which is required for binding. Mutagenesis studies have mapped a putative factor H binding site to a cleft between the two subunits. Presented here is a new atomic structure of CspA which shows a degree of flexibility between the subunits which may be critical for factor H scavenging by increasing access to the binding interface and allows the possibility that the assembly can clamp around the bound complement regulators.


  • Organizational Affiliation
    • Sir William Dunn School of Pathology, University of Oxford, South Parks Road, Oxford OX1 3RE, England.

Macromolecule Content 

  • Total Structure Weight: 85.91 kDa 
  • Atom Count: 6,004 
  • Modeled Residue Count: 720 
  • Deposited Residue Count: 724 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
COMPLEMENT REGULATOR-ACQUIRING SURFACE PROTEIN 1 (CRASP-1)
A, B, C, D
181Borreliella burgdorferi ZS7Mutation(s): 0 
UniProt
Find proteins for A0A0H3BZN5 (Borreliella burgdorferi (strain ZS7))
Explore A0A0H3BZN5 
Go to UniProtKB:  A0A0H3BZN5
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0H3BZN5
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 4.06 Å
  • R-Value Free:  0.271 (Depositor), 0.314 (DCC) 
  • R-Value Work:  0.262 (Depositor), 0.288 (DCC) 
  • R-Value Observed: 0.263 (Depositor) 
Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 115.37α = 90
b = 44.16β = 90.69
c = 186.54γ = 90
Software Package:
Software NamePurpose
BUSTERrefinement
XDSdata reduction
XSCALEdata scaling
PHASERphasing

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2013-06-05
    Type: Initial release
  • Version 1.1: 2013-06-12
    Changes: Database references
  • Version 1.2: 2023-12-20
    Changes: Data collection, Database references, Other, Refinement description