3MOI

The crystal structure of the putative dehydrogenase from Bordetella bronchiseptica RB50

• PDB DOI: https://doi.org/10.2210/pdb3MOI/pdb

• Classification: OXIDOREDUCTASE
• Organism(s): Bordetella bronchiseptica
• Expression System: Escherichia coli BL21
• Mutation(s): No 


• Deposited: 2010-04-22 Released: 2010-05-26 
• Deposition Author(s): Zhang, R., Evdokimova, E., Egorova, O., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

---

Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.50 Å
• R-Value Free: 0.236 
• R-Value Work: 0.197 
• R-Value Observed: 0.199 

Literature

The crystal structure of the putative dehydrogenase from Bordetella bronchiseptica RB50

Zhang, R., Evdokimova, E., Egorova, O., Savchenko, A., Edwards, A., Joachimiak, A.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 42.63 kDa 
• Atom Count: 2,979 
• Modelled Residue Count: 381 
• Deposited Residue Count: 387 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Probable dehydrogenase	A	387	Bordetella bronchiseptica	Mutation(s): 0  Gene Names: BB4777, GI:33603750
UniProt
Find proteins for A0A0H3LRN8 (Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)) Explore A0A0H3LRN8  Go to UniProtKB:  A0A0H3LRN8

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.50 Å
• R-Value Free: 0.236 
• R-Value Work: 0.197 
• R-Value Observed: 0.199 
• Space Group: P 3₁ 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 122.634	α = 90
b = 122.634	β = 90
c = 79.419	γ = 120

Software Package:

Software Name	Purpose
SBC-Collect	data collection
HKL-3000	phasing
REFMAC	refinement
HKL-3000	data reduction
HKL-3000	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2010-05-26 
Deposition Author(s): Zhang, R., Evdokimova, E., Egorova, O., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History  

• Version 1.0: 2010-05-26
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Advisory, Version format compliance
• Version 1.2: 2024-02-21
  Changes: Data collection, Database references