3GAA | pdb_00003gaa

The crystal structure of the protein with unknown function from Thermoplasma acidophilum

PDB DOI: https://doi.org/10.2210/pdb3GAA/pdb

Classification: structural genomics, unknown function
Organism(s): Thermoplasma acidophilum
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2009-02-16 Released: 2009-03-24
Deposition Author(s): Zhang, R., Borovilos, M., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.70 Å
R-Value Free:
0.256 (Depositor), 0.263 (DCC)
R-Value Work:
0.196 (Depositor), 0.206 (DCC)
R-Value Observed:
0.199 (Depositor)

wwPDB Validation 3D Report Full Report

Validation slider image for 3GAA

This is version 1.2 of the entry. See complete history.

Literature

The crystal structure of the protein with unknown function from Thermoplasma acidophilum

Zhang, R., Borovilos, M., Clancy, S., Joachimiak, A.

To be published.

Macromolecule Content

Total Structure Weight: 137.94 kDa
Atom Count: 9,299
Modeled Residue Count: 1,213
Deposited Residue Count: 1,260
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
uncharacterized protein Ta1441	A, B, C, D, E	252	Thermoplasma acidophilum	Mutation(s): 0 Gene Names: GI:10640783, Ta1441
UniProt
Find proteins for Q9HIA0 (Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)) Explore Q9HIA0 Go to UniProtKB: Q9HIA0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9HIA0
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.70 Å
R-Value Free: 0.256 (Depositor), 0.263 (DCC)
R-Value Work: 0.196 (Depositor), 0.206 (DCC)
R-Value Observed: 0.199 (Depositor)

Space Group: H 3 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 184.318	α = 90
b = 184.318	β = 90
c = 260.485	γ = 120

Software Package:

Software Name	Purpose
SBC-Collect	data collection
HKL-2000	data scaling
REFMAC	refinement
HKL-2000	data reduction

Structure Validation

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View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2009-03-24

Deposition Author(s):

Midwest Center for Structural Genomics (MCSG)

Revision History (Full details and data files)

Version 1.0: 2009-03-24
Type: Initial release
Version 1.1: 2011-07-13
Changes: Advisory, Refinement description, Version format compliance
Version 1.2: 2024-02-21
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.