3WTB | pdb_00003wtb

Crystal structure of Gox0525

PDB DOI: https://doi.org/10.2210/pdb3WTB/pdb

Classification: OXIDOREDUCTASE
Organism(s): Gluconobacter oxydans 621H
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2014-04-09 Released: 2015-04-15
Deposition Author(s): Yuan, Y.A., Lin, J.P.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.20 Å
R-Value Free:
0.186 (Depositor), 0.190 (DCC)
R-Value Work:
0.155 (Depositor), 0.161 (DCC)
R-Value Observed:
0.156 (Depositor)

Starting Model: experimental
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This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of Gox0525

Yuan, Y.A., Lin, J.P.

To be published.

Macromolecule Content

Total Structure Weight: 203.01 kDa
Atom Count: 14,893
Modeled Residue Count: 1,946
Deposited Residue Count: 1,968
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Putative oxidoreductase	A, B, C, D, E A, B, C, D, E, F, G, H	246	Gluconobacter oxydans 621H	Mutation(s): 0 Gene Names: GOX0525 EC: 1.1.1
UniProt
Find proteins for Q5FTJ3 (Gluconobacter oxydans (strain 621H)) Explore Q5FTJ3 Go to UniProtKB: Q5FTJ3
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q5FTJ3
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.20 Å
R-Value Free: 0.186 (Depositor), 0.190 (DCC)
R-Value Work: 0.155 (Depositor), 0.161 (DCC)
R-Value Observed: 0.156 (Depositor)

Space Group: P 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 58.061	α = 90
b = 56.033	β = 93.2
c = 263.992	γ = 90

Software Package:

Software Name	Purpose
HKL-2000	data collection
MOLREP	phasing
REFMAC	refinement
HKL-2000	data reduction
HKL-2000	data scaling

Structure Validation

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Entry History

Deposition Data

Released Date: 2015-04-15

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2015-04-15
Type: Initial release
Version 1.1: 2023-11-08
Changes: Data collection, Database references, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.