Identification of the SSB-interaction platform of Deinococcus radiodurans uracil-DNA glycosylase
George, N.P., Keck, J.L.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Uracil-DNA glycosylase | 255 | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 | Mutation(s): 0  Gene Names: DR0689, DR_0689, ung EC: 3.2.2.27 | ||
UniProt | |||||
Find proteins for Q9RWH9 (Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)) Explore Q9RWH9  Go to UniProtKB:  Q9RWH9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9RWH9 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Single-stranded DNA-binding protein | 12 | Deinococcus radiodurans | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for Q9RY51 (Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)) Explore Q9RY51  Go to UniProtKB:  Q9RY51 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9RY51 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
IOD Query on IOD | C [auth A], D [auth A] | IODIDE ION I XMBWDFGMSWQBCA-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
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a = 78.343 | α = 90 |
b = 92.64 | β = 90 |
c = 66.012 | γ = 90 |
Software Name | Purpose |
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DENZO | data reduction |
SCALEPACK | data scaling |
PHASER | phasing |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
HKL-2000 | data collection |